Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00143 ATGGTAGAAATGTATAACTTGTTCCTTTCATTATGTTTGGTTGCCATGATACCAATCTTGAAAGCTAATATCTTAGAGAATACAACATACCTGAATGATTTTGATGAGGAATATTGGAAGGAAAGAGCAGCAATTGCTGAAAAAGATAACAGAGAAGCATATTTCTTAAATCCATACGAGATTTCTGGCAACTTCAGTTCTACTGTTTTAGAAGACATAGTTGGAAACAAACATGCGAGAAGAAGCTTGAAGGGTAAAAATGCAAGAGTTCCATGCATGGCAACAAACAACATTGATAGATGTTGGAGGTGTGATCCTAATTGGGCAAAGTATCGTCAAAAGCTTGCAAATTGTGTTCAAGGTTTTGGAAAAAACACAATTGGTGGAAAAAATGGTCCAATTTATATAGTTACTGATTCCTCAGACAATGACATGGTTAATCCAAAACCAGGTACTCTTCGCCATGCAGTCACAAGAACAGGGCCATTATGGATTATCTTTGCACGTAGCATGTTTATTAGACTCAACCAAGAACTCATAATGACTAGTGACAAAACTATTGATGGAAGAGGAGTTGATGTTCACATTACTAGAGGTGCAGGAATCACCATTCAGAACATTAAAAATGTGATTATTCATGGAATTAAGATTTATAATATTGTTCCTGGTACCGGTGGACTTATCAGAGATTCTGAGACTCATTTTGGTCAAAGGTTAAGCACAGAAGGTGATGGAATCTCTATTTTTGGCTCTAGCAATATTTGGATTGACCATGTTTCTATGAGAAAATGTGCAGATGGTCTCATTGATGCCATTATGGGATCTACAGCCATTACCATTTCTAATAGTCATTTCACAGATCAAAATCACGTTATCCTGTTTGGTGGGAGGGAAGAGCACACAATTGATAAGATGATGCAAGTGACTGTAGCTTTCAATCATTTTGGGAAGAGATTGCTGCAAAGAATGCCAAGGTGCAGATTTGGATTTTTCCATATTGCTAACAATGATTATACTCATTGGCAAATGTATGCCATTGGTGGTAACAAGAATCCAACTATTATTAGTGAGGGCAATCGATTTTGGGCTCCGGATAATATTCATGCTAAAGAGAGCGGCGTGGATATGCCGTGGCCATGGCGTCATGCCACAGAAAGTATCAAAAATTTCGATGGCTTCCGGGCCGGCATTGATCTTGTTGTTCTGTTCTGTCTGTCGTCATCCAAATTGATAAACACACGCGCTTTTTTCACTCGGCTTGTTTTTTCTCTCACAATTGCTTGGTTGTCATTGAGTTGGTCTTGTAGAGAGTGTTTGGAACTGTGGAATTTTCATTTCTCATCATGGCATCTAAATCAAGAGAGTGAGAATGGTGGTGGTGGTGTTGCTACCTACACAGTTCACATTCCACTAACCCCTGATAACCAACCAATGGAGATTGCTCTGGAGAGATCGACTTCGAGGCGAGTGGAGGACCAATATGCATCTAGTTCATTGTTCACTGGGGGTTTCAATCAGGTTACAAGGGCTCATTTGAAGGAGAAGATGATTGAGTCTGAGTCAAGCCACCCCCAGATGTCGGGGGTGAAGGGATCGTCCTGCGCGGTCCCTGGCTGTGATGGGAAGGTTATGACCGATGAGAGGGGGTTAGACATACTCCCTTGTGAGTGTGATTACAAGATTTGCAGGGATTGTTATAGGGATGCTTTGAGAACTGGTGAGGGGATTTGCCCTGGCTGCAAGGAACCTTACAAGGAGTTGGATGCAAATGATGGATATAGGGCCGGCCAGCAGCCTGCACTGCCCTTGCCACCCGGTGCTGGAGTGTCGAAGATGGAGAGGAGGTTGTCGTTGATGAAATCGGGGACTTTGACAAGGAGCCAGGCTAATAATGACTTTGATCATGCTCAGTGGTTGTTTGAAACTAAGGGGAGCTATGGCTATGGGAATGCTATGTGGCCGAAAGAGCCCGAAAACGATGCTAGTTCTGTTTCTGAATGGATGGGTGGTGATCCTCATGTGTTCAAGGAAAAGCCATGGAGACCTTTGACCCGGAAATTGACTATCTCTGCTGCAATTCTGAGTCCATATAGGCTAATAATATTTGCTCGGCTAGTGATTCTTGGTTTCTTCTTAGCGTGGAGGGTTCGAAACCCCAATGAAGATGCACTCTGGCTGTGGGGTATGTCTGTTGTTTGTGAAATCTGGTTTGCCTTCTCCTGGCTGCTTGATCAGCTTCCTAAGCTCTTCCCTGTCAACCGGTTCGCGGATCTTGATGTTCTGAAAGAGAAGTTTGAAACTCCCACTCCCAACAATCCTTCTGGCAAGTCTGATCTCCCAGGAATAGATATTTTTGTGTCGACTGCGGATCCTGAAAAAGAACCTCCACTTGTCACAGCAAATACTATTCTTTCCATTCTAGCTGCCGATTATCCGGTAGAGAAACTTGCATGTTATGTCTCTGACGATGGAGGTGCACTTCTAACTTTTGAGGCCATGGCAGAGGCTGCAAGTTTTGCCAACTTGTGGGTTCCTTTTTGCCGAAAGCATGACATTGAACCGAGGAACCCCGACTCATACTTTAGTATGAAGAGAGATCCCTACAAGAACAAAGTTCTCCCTGACTTTGTAAGGGATAGAAGGAGGGTAAAGCGTGAATATGATGAGTTCAAGGTTCGGATCAATGGCCTTCCTGATTCAATCCGCCGGCGTTCTGATGCTTACAATGCCAGAGAAGAGATAAAAGCTATGAAGCTTTGGAGGGAGAATGGACATGATGAACCAATGGAGAATGTGAAAATTCCTAAAGCTACTTGGATGGCAGATGGTACCCACTGGCCTGGCACTTGGACAATTCCAGCATCGGAACATTCTAGGGGCGATCATGCTAGTATCATACAGGTCATGTTAAAACCTCCAAGTGATGAACCACTAACTGGTGTTGCATCAGATGCAAATGCTATGAATTTAACCGAAGTTGATATTCGCCTTCCCATGCTTGTCTATGTTTCTCGAGAAAAAAGACCAGGCTATGATCACAACAAGAAGGCTGGGGCGATGAATGCGCTGGTCCGAGCCTCAGCCATTATGTCAAATGGTCCTTTCATACTTAATCTGGACTGTGACCATTACATATTTAATTCCCAGGCATTGAGAGAAGGTATGTGCTTCATGATGGACCGTGGTGGCGACAGAATCTGCTATGTTCAATTCCCTCAGAGGTTCGAAGGAATAGACCCTTCGGATCGCTATGCCAATCATAACACAGTCTTCTTTGATGTCAATATGCGCGCCCTTGATGGGATTCAAGGTCCTGTATATGTAGGCACAGGTTGCTTATTCAGAAGGACTGCACTCTATGGCTTTGATCCACCTCGGGTGAAAGAAGAGTCTAGTTGCTTCGGCCGCAAGAATAAGAAATCCTCGACCGTTGCCTCACTCCCGGAAACTGGTTCTGTTGAGGATCAGTCATTTGCAAATGGTGGCGCCGACGATGAAGGCCTTGCTCTTATTCCCAAGAGTTTTGGCAACTCAAGTCTCCTTATTGATTCAATCAGGGTGGCCGAGTTCCAAGGTCGACCCCTCGCTGATCATTCGTCCATCAAAAATGGAAGACCACCGGGTGCTCTAACCCTTCCTCGGGATCTTCTGGATGCTGCTACTGTGGCAGAGGCTATCAATGTTATCTCCTGCTGGTATGAAGACAAGACTGAATGGGGCCTTCGAATCGGGTGGATTTATGGGTCTGTTACTGAGGATGTTGTGACAGGTTATAGAATGCACAATAGGGGATGGAGGTCCATATATTGTGTGACTAAGAGGGATGCCTTCCGTGGCACTGCTCCGATCAACCTGACCGACCGGCTCCACCAGGTTCTTCGTTGGGCTACCGGCTCTGTCGAAATATTCTTTTCTCGAAACAATGCTCTTTTGGCCAGCCTCAAATTGAAGTTCCTACAGAGAATAGCTTACCTCAATGTCGGAATCTATCCTCCAAGTAACATTCCTAGTGTACCTCTTGGGCATCACCGTGACCCTTGTCTTACTCGCCATCCTCGAGTTCTCCAAGGCCTACTAAAGGTGATGGCTGGCATTGAAATTTCATTCACTTTGACATCAAAGTCAGCCGGGGACGATGAAAACGACGAATTTGCTGACCTCTATATCATCAAATGGACATCTCTGATGATACCACCAATCACCATCATGATGGTAAACTTGATAGCAATAGCTGTGGCAGTTAGCAGAACTATATACAGCGAAGATCGAAAATGGAGCAGCTTGCTGGGTGGTGTGTTCTTCAGCTTATGGGTGCTGGCTCATCTCTATCCCTTTGCAAAAGGGCTCATGGGAAGAAGGGGTAGAACACCAACCATTGTGTTTGTATGGTCAGGGCTTATATCAATCACCATTTCTCTTCTTTGGGTTGCCATTGATCCTCCTTCAGGTAGCTCTGATATTGGAGGATCTTTTCAATTCCCTTGA 4485 0.4444 MVEMYNLFLSLCLVAMIPILKANILENTTYLNDFDEEYWKERAAIAEKDNREAYFLNPYEISGNFSSTVLEDIVGNKHARRSLKGKNARVPCMATNNIDRCWRCDPNWAKYRQKLANCVQGFGKNTIGGKNGPIYIVTDSSDNDMVNPKPGTLRHAVTRTGPLWIIFARSMFIRLNQELIMTSDKTIDGRGVDVHITRGAGITIQNIKNVIIHGIKIYNIVPGTGGLIRDSETHFGQRLSTEGDGISIFGSSNIWIDHVSMRKCADGLIDAIMGSTAITISNSHFTDQNHVILFGGREEHTIDKMMQVTVAFNHFGKRLLQRMPRCRFGFFHIANNDYTHWQMYAIGGNKNPTIISEGNRFWAPDNIHAKESGVDMPWPWRHATESIKNFDGFRAGIDLVVLFCLSSSKLINTRAFFTRLVFSLTIAWLSLSWSCRECLELWNFHFSSWHLNQESENGGGGVATYTVHIPLTPDNQPMEIALERSTSRRVEDQYASSSLFTGGFNQVTRAHLKEKMIESESSHPQMSGVKGSSCAVPGCDGKVMTDERGLDILPCECDYKICRDCYRDALRTGEGICPGCKEPYKELDANDGYRAGQQPALPLPPGAGVSKMERRLSLMKSGTLTRSQANNDFDHAQWLFETKGSYGYGNAMWPKEPENDASSVSEWMGGDPHVFKEKPWRPLTRKLTISAAILSPYRLIIFARLVILGFFLAWRVRNPNEDALWLWGMSVVCEIWFAFSWLLDQLPKLFPVNRFADLDVLKEKFETPTPNNPSGKSDLPGIDIFVSTADPEKEPPLVTANTILSILAADYPVEKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHDIEPRNPDSYFSMKRDPYKNKVLPDFVRDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIKAMKLWRENGHDEPMENVKIPKATWMADGTHWPGTWTIPASEHSRGDHASIIQVMLKPPSDEPLTGVASDANAMNLTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIFNSQALREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPRVKEESSCFGRKNKKSSTVASLPETGSVEDQSFANGGADDEGLALIPKSFGNSSLLIDSIRVAEFQGRPLADHSSIKNGRPPGALTLPRDLLDAATVAEAINVISCWYEDKTEWGLRIGWIYGSVTEDVVTGYRMHNRGWRSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASLKLKFLQRIAYLNVGIYPPSNIPSVPLGHHRDPCLTRHPRVLQGLLKVMAGIEISFTLTSKSAGDDENDEFADLYIIKWTSLMIPPITIMMVNLIAIAVAVSRTIYSEDRKWSSLLGGVFFSLWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLISITISLLWVAIDPPSGSSDIGGSFQFP 1494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00143 1494 SMART amb_all 170 367 IPR002022 -
Adu05g00143 1494 Pfam Pectate lyase, N terminus 33 83 IPR007524 GO:0030570
Adu05g00143 1494 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 977 1130 IPR029044 -
Adu05g00143 1494 PRINTS Pollen allergen Amb family signature 142 167 IPR018082 -
Adu05g00143 1494 PRINTS Pollen allergen Amb family signature 242 263 IPR018082 -
Adu05g00143 1494 PRINTS Pollen allergen Amb family signature 344 363 IPR018082 -
Adu05g00143 1494 PRINTS Pollen allergen Amb family signature 322 341 IPR018082 -
Adu05g00143 1494 PRINTS Pollen allergen Amb family signature 118 135 IPR018082 -
Adu05g00143 1494 PRINTS Pollen allergen Amb family signature 178 194 IPR018082 -
Adu05g00143 1494 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1354 1492 - -
Adu05g00143 1494 SUPERFAMILY Pectin lyase-like 86 384 IPR011050 -
Adu05g00143 1494 Pfam Pectate lyase 180 361 IPR002022 -
Adu05g00143 1494 Pfam RING/Ubox like zinc-binding domain 536 585 - -
Adu05g00143 1494 Gene3D - 95 397 IPR012334 -
Adu05g00143 1494 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 477 1334 - -
Adu05g00143 1494 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 517 598 IPR013083 -
Adu05g00143 1494 SUPERFAMILY Nucleotide-diphospho-sugar transferases 797 1327 IPR029044 -
Adu05g00143 1494 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 477 1334 - -
Adu05g00143 1494 SUPERFAMILY RING/U-box 518 591 - -
Adu05g00143 1494 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 1354 1492 - -
Adu05g00143 1494 Pfam Cellulose synthase 1353 1484 IPR005150 GO:0016020|GO:0016760|GO:0030244
Adu05g00143 1494 Pfam Cellulose synthase 782 1336 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00143 Adu-Chr5 1593479 1602899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00143 454 1494 Glycosyltransferase AT3G03050 67.086 0.0 1477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00143 K20924 - gmx:100813900 1704.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00143 05 1593479 1602899 Adu05g00143 05 1593479 1602899 ECH