Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00128 ATGATTTATATAATGAGTAACGTGTATTTGGTTCTGACCCGTCCTCGACGGTCCAACCCCGTGTCGGGACTGGTCGTTCATTCACGCGGATTAGTGGCTTTCATCAGTTTCGTGCAAAAAACTTCAGACCCACGTCGCTCGCACGTGCCTCCCATTTCCTCCGCACGTGCGCTCTCTAAATCCCTCTTAAAATCTCTCTCTCTCTCTCTGCAACTGCAACTTCTATCTCCTCCATTGACCCCCTCGCACTTCACCAGCAACACGCACTTTGCTCCGCCGACAACAAACTCATTTTCCTTTTTTCCGTCACCGGAGATCTCTGCCGGATCATTTCCGATGTCGTCGATAAAGACTGTTAAGGTCAGTAACGTTTCCTTGGGAGCTACTGATCGAGACATTAAGGAGTTCTTTTCTTTTTCTGGTGACATTGAATATGTTGAGCTTCGGAGTCATGATGAACGGTCCCAAATTGCTTATGTTACCTTCAAGGATGCACAGGGAGCTGAGACTGCAGTACTGCTATCGGGAGCAACTATAGTTGATTTGTCGGTTACAATAACTCCAGATCCAGATTACAAACTTCCACCTGCTGCCTTTGCATCAGCTCCAAAAGAAAGTCAAGCTCCCGGTGGTGCTGATTCTGCTTTAAGGAAGGCAGAGGATGTGGTTTCAAGCATGCTGGCCAAGGGCTTTATCTTAGGGAAGGATGCTGTCAACAAAGCAAAGACTTTTGATGAGAAGCACCAATTAACCTCATCTGCCTCGGCAAAAGTTGCATCTATTGATCAGAAAATTGGGTTCAGTGAGAAAATAACTGCTGGTGCTTCAGCTGTAAGTGGTAGAGTTCGAGAGGTTGACCAAAAGTTCCAGGTTTCAGAGAAGACCAAATCGGCATTTGCAGCTGCAGAGCAAAAAGTCAGTACTGCTGGTTCTGCCTTGATGAAGAATCGCTATATACTTACTGGTGCCTCCTGGGTAACAGGTGCTTTCAACAGGGTTTCTAAGGCGGCTGAGGATGTAGGACAGAAGACGAAAGAGAAAGTAGTTAGCGCAGAAGAGCAACAGAAGCGACAAGTGGAAGATCAGTATGCGCAAGTCCTTTCTGAGTCCCCAAAAGCAGGTTCGGCAGCAAGTGAACATCACTCTTCCAAGCCTGCCCCTGCTCAGGGTTTGATCCTTTGA 1182 0.4721 MIYIMSNVYLVLTRPRRSNPVSGLVVHSRGLVAFISFVQKTSDPRRSHVPPISSARALSKSLLKSLSLSLQLQLLSPPLTPSHFTSNTHFAPPTTNSFSFFPSPEISAGSFPMSSIKTVKVSNVSLGATDRDIKEFFSFSGDIEYVELRSHDERSQIAYVTFKDAQGAETAVLLSGATIVDLSVTITPDPDYKLPPAAFASAPKESQAPGGADSALRKAEDVVSSMLAKGFILGKDAVNKAKTFDEKHQLTSSASAKVASIDQKIGFSEKITAGASAVSGRVREVDQKFQVSEKTKSAFAAAEQKVSTAGSALMKNRYILTGASWVTGAFNRVSKAAEDVGQKTKEKVVSAEEQQKRQVEDQYAQVLSESPKAGSAASEHHSSKPAPAQGLIL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00128 393 SMART rrm1_1 118 187 IPR000504 GO:0003723
Adu05g00128 393 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 115 376 - -
Adu05g00128 393 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 120 179 IPR000504 GO:0003723
Adu05g00128 393 Coils Coil 349 369 - -
Adu05g00128 393 MobiDBLite consensus disorder prediction 348 393 - -
Adu05g00128 393 CDD RRM_Vip1_like 119 187 IPR034360 -
Adu05g00128 393 MobiDBLite consensus disorder prediction 360 377 - -
Adu05g00128 393 Gene3D - 114 187 IPR012677 -
Adu05g00128 393 SUPERFAMILY RNA-binding domain, RBD 103 189 IPR035979 GO:0003676
Adu05g00128 393 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 117 189 IPR000504 GO:0003723
Adu05g00128 393 PANTHER BINDING PARTNER OF ACD11 1 115 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00128 Adu-Chr5 1374345 1378362 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00128 - - gmx:100809613 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00128 05 1374345 1378362 Adu05g00128 05 1374345 1378362 ECH