Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00006 ATGCCAAACAAGGAGAATTCAGCGCTAGTGGAAGCAAAGGTTCCTTTGCTAAACAGTAACCAATCTTTAAGAGTTCATGAAAATGGAGATGATCAAAACCATGAAGACGATGTCCTGTCTCAAAGAATATGGATTGAATCAAAGAAGCTATGGCATATAGTAGGCCCTGCAATCTTCAGCCGCATAACTTCCTACATGATTTTGGTGATCACACAAGCCTTCGCAGGCCACCTTGGCGATCTTGAACTCGCAGCTTTCTCCATTTCCAACAATGTCATCGTCGGCTTCGACTTCGGCCTCTTGCTGGGTATGGCGAGTGCGTTGGAAACTCTGTGCGGGCAGGCGTATGGCGCCAAGAAACACTACATGCTAGGCGTATACATGCAGCGATCATGGATAGTTCTCTTCATATGCTGCATCTTCCTGGTTCCTCTCTACGTGTTTGCGACGCCGGTCTTAAGAGTTTTGGGTCAGCCGGAGGAATTGGCTGTCCTGGCCGGCGAGGTGGCGCTATGGATGATTCCTCTTCACTTCAGCTTCGCGTTCCAGTTCCCACTGCAGAGGTTTCTTCAGAGCCAGCTGAAGACAGCCGTGATAGCATGGGTGTCGTTGGTGTCGCTGCTGGTGCACATCGCCATTAGCTGGTTCTTTGTGTCGCAGCTGAAGTTCGGGGTGGTTGGAACAACCGCCACGGTGAATTTCTCGTGGTGGGTCATGACTTTGGGGTTGTTTGGGTACACAGTTTCCGGTGGCTGCCCAAACACTTGGACTGGTTTCTCGCTTGAAGCTTTTGCTGGCCTTTGGGACTTTGTTAAACTCTCTGCTTCTTCTGGTCTCATGCTCTGCTTGGAGAATTGGTATTACAGAATTCTGATACTGATGACAGGAAATCTACCGAACGCAGAGATTGCTGTGGATGCTTTGTCCATATGCATGACAATCAATGGCTTGGAAATGATGATTCCTCTGGCATTCTTTGCTGCTACAGGAGTGAGGGTTGCAAACGAACTTGGAGCTGGGAATGGTAAAGGAGCAAAATTTGCTACAAAAGTATCTGTGATGACATCAATTGCAATAGGACTGTTCTTCTGGATGTTGATTTTGATATTTCATGACAAATTCGGATACATATTCTCTACTAGCAAACCTGTCCTTGATGAAGTTAACAAGCTTTCTCTTCTGTTAGCCTTCACTATTCTCCTCAACAGTGTTCAGCCAGTTCTTTCAGGTGTGGCAGTAGGATCAGGGTGGCAATCATATGTTGCATACATAAACTTGGGCTGCTACTATCTCATTGGGGTTCCTCTTGGATTGTTGATGGGCTGGGTCTTCAATCAAGGAGTTATGGGAGTTTGGGCCGGAATGATTTTTGGTGGAACAGCAACTCAAACATTAATATTAGGCCTTATAACCATTCGGTGTGACTGGGACAAAGAGGCTGAGCGAGCCAAATTGCATTTGAGAAAGTGGGACAATCCAAAAGAACTGAACTAA 1494 0.4659 MPNKENSALVEAKVPLLNSNQSLRVHENGDDQNHEDDVLSQRIWIESKKLWHIVGPAIFSRITSYMILVITQAFAGHLGDLELAAFSISNNVIVGFDFGLLLGMASALETLCGQAYGAKKHYMLGVYMQRSWIVLFICCIFLVPLYVFATPVLRVLGQPEELAVLAGEVALWMIPLHFSFAFQFPLQRFLQSQLKTAVIAWVSLVSLLVHIAISWFFVSQLKFGVVGTTATVNFSWWVMTLGLFGYTVSGGCPNTWTGFSLEAFAGLWDFVKLSASSGLMLCLENWYYRILILMTGNLPNAEIAVDALSICMTINGLEMMIPLAFFAATGVRVANELGAGNGKGAKFATKVSVMTSIAIGLFFWMLILIFHDKFGYIFSTSKPVLDEVNKLSLLLAFTILLNSVQPVLSGVAVGSGWQSYVAYINLGCYYLIGVPLGLLMGWVFNQGVMGVWAGMIFGGTATQTLILGLITIRCDWDKEAERAKLHLRKWDNPKELN 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00006 497 PANTHER PROTEIN DETOXIFICATION 29 484 - -
Adu05g00006 497 Pfam MatE 56 215 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu05g00006 497 Pfam MatE 278 438 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu05g00006 497 CDD MATE_eukaryotic 46 482 IPR045069 GO:0042910|GO:1990961
Adu05g00006 497 PANTHER MULTIDRUG RESISTANCE PROTEIN 29 484 - -
Adu05g00006 497 TIGRFAM matE: MATE efflux family protein 56 452 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00006 Adu-Chr5 54943 62466 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00006 K03327 - gmx:100796652 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00006 05 54943 62466 Adu05g00006 05 54943 62466 ECH