Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g03197 ATGGATTATTCTTCTTCGTTATCTTCTCTGAGCTTTCATTTCAATAGCTTCAGAGCTTCAGCGAACTCGTTCCTCTCACAATACGAACCTCTTCTTCTGCTTCTCGCTCCTCTCTTCTCTCTCATCCTCGCACACTTGCTTCGCTCATTTTTCAATCTCATCCATGAAAGAGGCCTCAAAGCTTCGCTCCTAGGGTTTCTTATGAGCTCTGTCAAATTGATCCCTGGAGTGAAGAGTTACATTGATAGAGAAAAACAGAAGGTTGTGGATAAAATGCAGTCTGATGGTAAATCTAAAAGAGAAGGTTGGAGAACAGAGTTGCCAAGCACAGGACTAGGCACTTTAGTACTTGAGAAAATGAAAGAGGAGAAAAGAAAAGATGTGGCTTGGCAAGGCAAATGCTCTGGTACAGTCTACATTGGTGGAAGTGAAATTGATGGACATTTTTCTCTGATAAATGAAGCATGCTCAATGTTTGCACATACCAATCCCTTGCATTTGGATGTATTCCAGAGTGTTGGACGCTTTGAGGCAGAAGTGGTTGCAATGACTGCAGCACTTCTTGGAAGTCAGGAAAAAAGTTCTGGAGGACAAGTATGTGGCAATATGACATCAGGAGGGACTGAAAGTATATTATTAGCAGTCAAATCATCTCGTGATTATATGAAATCTAAGAAAGGAATTACAAGACCCGAAATGATAATTCCTGTGTCTGCACACTCAGCATATGACAAGGCTGCACAGTATTTCAATATCAAACTATGGCGTGTTGCAGTTAACAAAGACTTCCAAGCGGATGTAAAAGCAATTCGACGCCATATTAACAAAAATACCATCTTGATTGTTGGATCTGCGCCAGGGTTTCCTCATGGAATAATTGACCCCATTGAAGAACTTGGTCAGTTGGCATCAAGCTTTGGTATTTGTCTCCATGTAGACCTTTGCCTGGGTGGCTTTGTATTGCCTTTTGCCCGTGAGCTTGGGTACCCTATACCACCTTTTGACTTTTCTGTTAAAGGAGTATCTTCAATATCAGTGGACGTGCATAAATATGGTTTAGCTCCCAAAGGAACAAGTATAGTCCTGTATAGAGACCATGAAATCAGAAAGGTAAGTCATTGGCCTGGTCATAAAGTATTAGGGTAG 1146 0.4136 MDYSSSLSSLSFHFNSFRASANSFLSQYEPLLLLLAPLFSLILAHLLRSFFNLIHERGLKASLLGFLMSSVKLIPGVKSYIDREKQKVVDKMQSDGKSKREGWRTELPSTGLGTLVLEKMKEEKRKDVAWQGKCSGTVYIGGSEIDGHFSLINEACSMFAHTNPLHLDVFQSVGRFEAEVVAMTAALLGSQEKSSGGQVCGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVAVNKDFQADVKAIRRHINKNTILIVGSAPGFPHGIIDPIEELGQLASSFGICLHVDLCLGGFVLPFARELGYPIPPFDFSVKGVSSISVDVHKYGLAPKGTSIVLYRDHEIRKVSHWPGHKVLG 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g03197 381 Gene3D - 146 380 IPR015421 GO:0003824
Adu04g03197 381 SUPERFAMILY PLP-dependent transferases 83 370 IPR015424 -
Adu04g03197 381 Pfam Pyridoxal-dependent decarboxylase conserved domain 175 367 IPR002129 GO:0016830|GO:0019752|GO:0030170
Adu04g03197 381 PANTHER - 25 372 - -
Adu04g03197 381 PANTHER SPHINGOSINE-1-PHOSPHATE LYASE 1 25 372 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g03197 161 364 Calmodulin-binding Proteins AT3G17760 26.818 3.07e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g03197 K01634 - gmx:100794395 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g03197 04 120080117 120084600 Adu04g03197 04 120080117 120084600 ECH