Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g02097 ATGGTGAAGATGGGTACCAAAAAGTTGAGTTTTTTGCTGTGTGTTTGGGTTTTGGTATTTGGGTTTTGTTATGGTAGGTTTGTGGTGGAGAAGAACAGCTTGAAGGTGACTTATCCGAAATCGTTGAAGGGTAGTTATGAGTGTGCAATTGGGAATTTTGGAGTTCCAAAATATGGAGGAGTAATGGTTGGTTCTGTGGTGTACCCAAAGGCGAATCAGAAGGGTTGCAAGAGCTTCAGTGATGTTGATATTTCGTTTCAAACCAAGCCTGGAAGCTACCCCACCTTTGTTCTTGTTGATCGTGGTGATTGCTTCTTCACTTTGAAGGCATGGAATGCGCAGAATGCTGGAGCCGCAGCTATTCTTGTAGCTGATGACAGGTCGGAAACATTGATCACAATGGACACACCTGAAGAAATGAATGCTGGAAAAGGCGATTATGTCGAGAAGATTACTATTCCGTCTGCCCTCATCAGCAGATCACTTGCAGATAAAATCAAGGACGCTCTCTCAAATGGTGAGATGGTTAACATTAATCTTGATTGGACTGAGGCTCTTCCACATCCTGACGAGAGAGTCGAGTATGAGTTGTGGACAAATAGTAATGACGAGTGTGGGCCGAAATGTGACAATCTAATCGAGTTTCTGAAGGACTTTAAAGGTGCAGCACAGCTACTTGAGAGGAAAGGGTTTACTCAGTTCACCCCTCGCTATATAACTTGGTATTGTCCCGAAGCATTTCTTTTAACCAAGCAGTGCAAGTCACAGTGCATAAACCATGGAAGGTACTGTGCTCCGGATCCCGAGCAAGATTTCAGTAAAGGGTATGATGGCAAAGATGTTGTTATTCAAAATTTACGACAGGCTTGCTTCTATAAAGTGGCAAATGCAAGTGGAAACCCTTGGCAATGGTGGGACTATGTGACTGACTTTGCAATCCGTTGCCCGATGAAAGACAAGAAGTTCACTGAAGAGTGTTCAGATCAAGTTATAACATCTCTTGGTGCTAATCTGAAGAAGATTAAGGAGTGTGTTGGTGATCCTCATGCTGATGTTGAAAACCCTGTTCTCAAGGCTGAACAGGATGCACAGATCGGAAAAGGCTCTCGTGGTGATGTCACTATACTGCCTACTCTTGTTATAAATGACAGACAGTATCGAGGTAAGCTGTCAAGAGCAGCAGTTCTCAAGGCAATCTGTGCTGGTTTCCAAGAGACTACTGAACCGTCAATATGCTTAACTCAAGACATGGAAACAAATGAATGTTTGGAAAATAATGGTGGTTGCTGGCAAGACAAATCTGCTAACATTACTGCATGCCGGGACACTTTCCGAGGAAGAGTATGTGAATGCCCTATTGTACAAAATGTGAAATTTGTTGGTGATGGATATACACACTGTGAAGCTTCAGGAGCCTTGAGGTGCGCAATCAACAATGGAGGTTGCTGGAAGGGAACCCAAGAGGGCAAGGTTTACTCAGCTTGCATTGATGACCACACGAAAGGTTGCAAGTGTCCACCTGGGTTCAAAGGCGACGGTATCAACAAATGTGAAGATATTGATGAGTGTGAAGAAAAATTGAAGTGCCAATGCCCACAATGCAAATGCAAGAACACTTGGGGAAGTTATGAGTGTAAATGTGGTAGCGGTTTGTTCTACTCACAAGAGAATGATGTTTGCATGGGTAAGTACACTGCTTCAATGTCTGGTGGGAACTTTCTCGGAATGATCATCCTCGTTGCGGCTGTTGCTGGTGTTGCTGGATATGCATTTTACAAGATTAGAATCCAGAGATATATGGATTCTGAGATAAGGCAAATCATGGCTCAATACATGCCCTTGGACAATCAACCTGAGGTCCCCAGTCAACTCCATCATGATATCTAG 1887 0.4356 MVKMGTKKLSFLLCVWVLVFGFCYGRFVVEKNSLKVTYPKSLKGSYECAIGNFGVPKYGGVMVGSVVYPKANQKGCKSFSDVDISFQTKPGSYPTFVLVDRGDCFFTLKAWNAQNAGAAAILVADDRSETLITMDTPEEMNAGKGDYVEKITIPSALISRSLADKIKDALSNGEMVNINLDWTEALPHPDERVEYELWTNSNDECGPKCDNLIEFLKDFKGAAQLLERKGFTQFTPRYITWYCPEAFLLTKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVIQNLRQACFYKVANASGNPWQWWDYVTDFAIRCPMKDKKFTEECSDQVITSLGANLKKIKECVGDPHADVENPVLKAEQDAQIGKGSRGDVTILPTLVINDRQYRGKLSRAAVLKAICAGFQETTEPSICLTQDMETNECLENNGGCWQDKSANITACRDTFRGRVCECPIVQNVKFVGDGYTHCEASGALRCAINNGGCWKGTQEGKVYSACIDDHTKGCKCPPGFKGDGINKCEDIDECEEKLKCQCPQCKCKNTWGSYECKCGSGLFYSQENDVCMGKYTASMSGGNFLGMIILVAAVAGVAGYAFYKIRIQRYMDSEIRQIMAQYMPLDNQPEVPSQLHHDI 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g02097 628 ProSitePatterns Calcium-binding EGF-like domain signature. 519 545 IPR018097 GO:0005509
Adu04g02097 628 Gene3D Laminin 412 458 - -
Adu04g02097 628 Gene3D - 24 189 - -
Adu04g02097 628 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 13 607 - -
Adu04g02097 628 SMART egfca_6 519 561 IPR001881 GO:0005509
Adu04g02097 628 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN, THIOREDOXIN-LIKE PROTEIN-RELATED 13 607 - -
Adu04g02097 628 Pfam PA domain 64 166 IPR003137 -
Adu04g02097 628 Gene3D Laminin 473 557 - -
Adu04g02097 628 CDD PA_VSR 52 180 - -
Adu04g02097 628 SUPERFAMILY PA domain 96 176 IPR046450 -
Adu04g02097 628 CDD EGF_CA 519 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g02097 Adu-Chr4 101582804 101588610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g02097 2 628 Miscellaneous Gene Families AT3G52850 71.701 0.0 948
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g02097 - - gmx:100806422 1065.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02097 04 101582804 101588610 Adu04g02097 04 101582804 101588610 ECH
Adu04g02097 04 101582804 101588610 Adu02g00556 02 7335844 7339096 PCT