Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01262 ATGGGAACACGCTTCAGACAGGCCGTTGGAGCTATCAAGGACTCTACCACGGTTGGCCTTGCCAAAGTTAATAGTGATTACAAGGAATTGGATGTTGCAATCGTGAAAGCTACCAATCACGTAGAATATCCTCCTAAAGAACGTCACATGCGCACAATATTGCATGCAACATCAGCAAGTCAACCAAGAGCAGATGTGGCATACTGCATTCACAAACTTTCCAAAAGGCTTTACAAGACAAAAAACTGGATAGTTGCTATAAAGACATTGATAGTGATGCATAGGTTATTGAGAGAGGGTGATCCTACTTTCAGAGAAGAGCTCCTAAACTACACACGCAGGGGACACTTTCTCCAAATATCCAATTTCAAAGATGACACCACTCCTCAAGCTTGGGATTGTTCTGCATGGGTTCGAACCTATGCACTTTTTTTACAAGAAAGACTTGAATGCTTTAGAACACTCAAATACGACATTGAAACAGAGCGTTTCGTAAAATCACCAACTTCTTCAGCTAAACCACTTACAAGAACTCGGTCTTTGGGTGCTGTAGAACTGTTGGAGCAGTTACCTGCATTGCAGCAACTTCTGCAACGCCTTATAGGTTGCCAGCCTGAAGGATGCGCTTATGGAAATTATCTTGTACAATATGCATTAGCCCTGGTATTGAAAGAGAGCTTCAAAATATATTGTTCATTGAATGATGGAATCATCAATCTTGTGGATGTGGTATCTGATGAATTTTTCTCTAACTATCACAAGTTCACAACAATGCAGGCTGAGCATCTTGCTCAGTTTTATGAATACTGCAAAGGGTTGGAGATTGCAAGGAATTTCCAATTTCCATGTCTAAGACAGCCACCCCCCTCTTTCCTTGCAACAATGGAAGAATACATTGGAGAAGCACCACAAACTAGCTCTGTTCATCAAAGACTGGAATATCGTGAAGCTGATCTATCACCTTCTAGAGAAGATCCTCCAGAAACCGACGAGCCTGAAGAGCCTCAAGAAACTGAAGGAGAAGAAGAGAATGAGGAAGAACCAGTTGTCAACGGAGAGCCAAATCCTGTGGAAGTGGAAGAGGCTGCTCCGCTGATATCGAATAATTGGATCGATGATGACTTGCTGGGTCTGCGTGAAATAAATCCTCAAGCTGTTGAACTTGAAGAAAGAAATGCTTTGGCCCTTGCAATTGTACAACCTGGTGGAAATAATTCAAACAATCTTGCTTTGAACAACATTGGTGACACTATTGGTTGGGAACTAGCACTGGTTACAGCACAAAGCAACCATACTAGCCAAGCGCCAGATCAAAATATGGCTGGTGGGTTTGACAAGTTATTACTAGATAGTTTATATGAAGATGAGAATGCAAGAAGACAACTTCAGCTCCAAAATGCAGGTTATGGATATGGTGGAAATGGAATGGCCATACAAAACCCATTTGAAAATGATAATGATCCATTTGCAGTGTCCAACAACATAGCACCCCCAACCAGTGTTCAATTGGCATTGCAACAACAACAACAACAAATGCTGTTCCAACAACAACAGAACAATAACATGATGATGACGCCTTACCAGCAGCAACCATATTACAATCCATTTGGAGACCCTTTACCAGTGCCTAACTATGCATATGGTTCTACACCAGCACAGGGAAATTATAATTTAATGTAG 1680 0.4155 MGTRFRQAVGAIKDSTTVGLAKVNSDYKELDVAIVKATNHVEYPPKERHMRTILHATSASQPRADVAYCIHKLSKRLYKTKNWIVAIKTLIVMHRLLREGDPTFREELLNYTRRGHFLQISNFKDDTTPQAWDCSAWVRTYALFLQERLECFRTLKYDIETERFVKSPTSSAKPLTRTRSLGAVELLEQLPALQQLLQRLIGCQPEGCAYGNYLVQYALALVLKESFKIYCSLNDGIINLVDVVSDEFFSNYHKFTTMQAEHLAQFYEYCKGLEIARNFQFPCLRQPPPSFLATMEEYIGEAPQTSSVHQRLEYREADLSPSREDPPETDEPEEPQETEGEEENEEEPVVNGEPNPVEVEEAAPLISNNWIDDDLLGLREINPQAVELEERNALALAIVQPGGNNSNNLALNNIGDTIGWELALVTAQSNHTSQAPDQNMAGGFDKLLLDSLYEDENARRQLQLQNAGYGYGGNGMAIQNPFENDNDPFAVSNNIAPPTSVQLALQQQQQQMLFQQQQNNNMMMTPYQQQPYYNPFGDPLPVPNYAYGSTPAQGNYNLM 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01262 559 SUPERFAMILY GAT-like domain 177 298 - -
Adu04g01262 559 SUPERFAMILY ENTH/VHS domain 29 160 IPR008942 -
Adu04g01262 559 MobiDBLite consensus disorder prediction 327 349 - -
Adu04g01262 559 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 4 544 - -
Adu04g01262 559 MobiDBLite consensus disorder prediction 311 326 - -
Adu04g01262 559 SMART enth_2 28 159 IPR013809 -
Adu04g01262 559 CDD ANTH_N 30 152 - -
Adu04g01262 559 MobiDBLite consensus disorder prediction 302 355 - -
Adu04g01262 559 Pfam ANTH domain 29 299 IPR011417 GO:0005543
Adu04g01262 559 Gene3D - 3 159 IPR008942 -
Adu04g01262 559 Gene3D ANTH domain 173 317 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Adu04g01262 559 ProSiteProfiles ENTH domain profile. 22 159 IPR013809 -
Adu04g01262 559 PANTHER CLATHRIN ASSEMBLY PROTEIN 4 544 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01262 Adu-Chr4 29099408 29106335 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01262 K20044 - gmx:100783084 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01262 04 29099408 29106335 Adu04g01262 04 29099408 29106335 ECH
Adu01g02124 01 88526489 88530308 Adu04g01262 04 29099408 29106335 PCT