Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01246 ATGGACAAAAACATTGTGCTAACAAAGCCATTCTCGTTGGAGAAAGAATCGGATGGTGATTCTGATTATAGAGCTCCTAATCTTATGAAACGTATACTAAGTCTATTTAAGAATGTGCGGCCAGGATCTGATCTTACTCGCTTTCAGCTGCCAGCAGAGTTCAACATGCCAAAGTCACAACTCCAATGCTATGGTGAAGAGGTATATTGTGGTGCTTGTGACATGCTAAGCAGATGCAACAATGGAGAAAGTCCAATTGATAGGTTCATATCAGTTGTAGCATGGAGCATTTCTACAAGACGCCCTGTCATTTTTGGAGTTGCTCCTTACAATCCCATTCTTGGAGAGACACACCATGTTTCCACACCAAATCTTAATGTCTTGCTAGAACAGGTTTCTCACCACCCTCCGGTGACTGCACTTCATGCAACAAATGAGAAGGAAAAGATAGAAACAATATGGTGTAGTTATGTTGTTCCAAAGTTCAATGGTGCCGCGGTGGAAGGTCAAGTGCATGGTAAAAGAGAACTGAAGCTCCACAATCATGGAGAGACATATGAAATGAATGCTCCTCATCTCATGATCAGGTTTCTTCCAGTTCCTAGCTGTGATTGGGTCGGCAATGTCCATATCCGGTGCCCGGAATCTGCCATTGAGGCAGAGTTATGCTACACAAGCCACACTCTGTTCGGATTCCGGTCAAGCCGGAAATCAATAAAGGGAAAGATCATTGATTCAATATCAACAAAGATTCTGTATGAAATTAATGGTAATTGGGATAGTATTGTGACAGCGAAGGATACAAATAATGGAGAAGTGAGAGTGATATATGATGCAAAAGAAGTCATTTCAGGGCTCCAAACTCCTGTTGTGAAGGACTCTGAGTGTGTGTGGGGAAGTGAATCAGCAGTTGTATGGAGTGAAGTAAGCGAAGCAATCATGAAGAAAGAGTGGGAAAAAGCAACAGAAGCAAAGAAATGTGTGGAGGAAAGGCAAAGGGAGCTTTCAAGAGAAAGGATCACAAAAGGAGAAACATGGCTTCCTAAGCATTTCACACTCTCTCACTCCAAAGAAGGAGGCTGGAATTGTTTTCCAATTCAAAACTGGGTCCCACCCTCTCCTATTCAGACCTTGTAA 1137 0.4257 MDKNIVLTKPFSLEKESDGDSDYRAPNLMKRILSLFKNVRPGSDLTRFQLPAEFNMPKSQLQCYGEEVYCGACDMLSRCNNGESPIDRFISVVAWSISTRRPVIFGVAPYNPILGETHHVSTPNLNVLLEQVSHHPPVTALHATNEKEKIETIWCSYVVPKFNGAAVEGQVHGKRELKLHNHGETYEMNAPHLMIRFLPVPSCDWVGNVHIRCPESAIEAELCYTSHTLFGFRSSRKSIKGKIIDSISTKILYEINGNWDSIVTAKDTNNGEVRVIYDAKEVISGLQTPVVKDSECVWGSESAVVWSEVSEAIMKKEWEKATEAKKCVEERQRELSRERITKGETWLPKHFTLSHSKEGGWNCFPIQNWVPPSPIQTL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01246 378 ProSitePatterns Oxysterol-binding protein family signature. 130 140 IPR018494 -
Adu04g01246 378 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 1 376 - -
Adu04g01246 378 Pfam Oxysterol-binding protein 35 357 IPR000648 GO:0008289
Adu04g01246 378 Gene3D - 114 289 - -
Adu04g01246 378 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 376 IPR000648 GO:0008289
Adu04g01246 378 Gene3D - 299 368 - -
Adu04g01246 378 SUPERFAMILY Oxysterol-binding protein-like 30 363 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01246 Adu-Chr4 28524188 28534153 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01246 K22285 - gmx:100780927 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01246 04 28524188 28534153 Adu04g01246 04 28524188 28534153 ECH