Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01088 ATGAGATCGGACAGAAGGAAGACGGAGAGGTGTTCAGGGCATGCCAAGTTTGTGCATTCCCTGTATGCCAGCCCTGCTATGAATATGAGAGGAGTGAAGGGAACCAGTGCTGCCCTCAATGCAACACTCGCTATAAGCGCCAAAAAGGTTGTCCTAGAGTTATTGGAGATGAGGAGGAGAATTTTAATGCAGAGGATTTTGATGATGAGTTTCAGATTAAGAACCATTCTGATGATGCTGATGCAAAACTTGCTTCTAATCATGGAGATGTTCTCTTTTGTTTTATATATCTTTTCTGATTTGGTTTACTGTTTTATAGTTGCTGGCAAGGATTTTGAAGGAGACAAAGAATTTTATAGCAATGAAGAATGGCAAGAAAGAGTAGAGAAATGGAAAGTAAGGCAAGAGAAGAAAGGTTTGCTAAACAAAGAGGAAGAAAAAGAACAAGTTGAAGATGATGATTACCTTTTGGCGGAAGCGAGGCAACCACTATGGCGCAAGGTTCCAATAGCTTCAAGCCTAATCAACCCATATCGCATAGTGATTGTGATGAGGCTGGTGATCCTAGCATTCTTTTTCAGATTTCGGATCTTAACTCCGGCCTATGATGCATATCCCTTGTGGCTTATCTCTGTGATATGTGAGATATGGTTTGCAATGTCATGGATCCTTGATCAGTTCCCAAAGTGGTTCCCAATCACACGCGAGACTTACTTGGACCGGTTGTCCATAAGGTTCGAGCGGGAAGGGGAGCCAAACCAACTGTGCCCTGTTGATGTGTTTGTGAGTACTGTGGATCCTCTGAAGGAGCCACCAATCATAACAGCAAACACTGTTCTTTCAATCCTCTCTGTTGACTATCCTGTTGAGAAGGTGTGCTGCTATGTCTCGGACGATGGTGCTTCCATGCTCCTCTTTGATTCGTTGGCCGAAACTGCCGAGTTTGCAAGAAGATGGGTTCCATTCTGCAAAAAGTATAAGATCGAGCCAAGGGCTCCTGAGTTCTATTTCTCTGAGAAGATTGATTACTTGAAGGACAAGGTTCAGCCTACATTCGTTAAGGAGCGAAGAGCCATGAAGAGAGAATATGAAGAATTCAAAGTGAAAATCAATGCCTTGGTGGCAAAGGCTCAGAAGAAACCAGAAGATGGATGGGTGATGCAAGATGGAACTCCATGGCCGGGAAACAACACTCGCGATCATCCGGGAATGATTCAGGTATATTTGGGTAGTGCTGGTGCACTAGACGTGGAAGGCAAGGAACTGCCACGACTCGTGTATATTTCGCGTGAGAAACGGCCTGGCTATCCACACCACAAGAAAGCTGGTGCCATGAATGCTTTGGTTCGAGTTTCTGCTGTTCTTACAAATGCACCTTTCATGCTGAATCTGGATTGTGATCACTACATCAATAATAGCAAGGCTTTAAGAGAGGCTATGTGCTTCTTAATGGACCCCCAGCTTGGGAAGAAGCTCTGTTATGTCCAATTTCCACAAAGATTCGATGGTATTGATCGCCATGATAGATATGCTAATCGAAACACTGTGTTCTTTGATATCAATATGAAAGGACTAGATGGGATTCAAGGTCCGGTTTATGTTGGTACTGGAACTGTGTTCAACAGGCAAGCATTGTACGGCTATGATCCACCGGTATCCGAGAAGAGGCCCAAGATGACTTGTGACTGTTGGCCATCATGGTGTTGCTTTTGTTGCGGTGGTTCCAGGAAATCCAAGTCAAAAAAGAAATCAGGAGCAGGAAGTGGTCTCTTAGGTGCATTATACAACAACAAGAAGAAGAAAATGATGGGAAAAAATTATGTTAGAAAGGGTTCTGGCTCCATGTTTGATCTTGAAGAGATTGAAGAAGGTCTTGAAGGCTATGAGGAGCTAGAGAAGTCATCTCTCATGTCACAGAAAAACTTTGAGAAGCGATTCGGGCAATCGCCGGTTTTCATTGCTTCCACTTTGATGGAGAATGGAGGACTACCTGAAGGCACCAATTCTCAAGCATTGGTTAAGGAGGCCATTCATGTTATAAGCTGTGGCTATGAAGAGAAGACTGATTGGGGCAAAGAGATTGGATGGATTTATGGGTCAGTGACAGAAGATATTTTGACTGGATTCAAGATGCACTGTAGAGGATGGAAATCAGTGTATTGCATGCCAAAGAGGGCAGCTTTCAAGGGATCTGCACCAATAAATCTATCAGATAGGTTGCACCAAGTTCTGAGGTGGGCTCTTGGTTCAGTTGAGATTTGCCTAAGTCGCCATTGTCCATTATGGTATGGCTATGGAGGAAAGTTGAAGTACCTAGAGAGGTTGGCTTACACTAACACCATTGTTTATCCATTCACTTCCATTCCTTTGCTTGCATATTGCACAATACCAGCTGTTTGTCTCTTGACCGGGAAATTCATCATCCCCACTCTGACCAACCTTGCTAGTGTATGGTTCATGGCCCTATTTATCTCCATCATCTTAACCGGTGTCCTCGAGCTCCGGTGGAGTGGCGTTACCATAGAAGACTGGTGGCGAAACGAGCAATTCTGGGTGATCGGAGGCGTATCGGCCCACCTTTTCGCCGTATTCCAAGGACTTCTGAAAGTCCTTGCCGGAGTAGACACCAACTTCACTGTCACAGCAAAAGCAGCAGACGATACAGAATTCGGAGAGCTGTATATGTTCAAATGGACAACACTTCTCATCCCACCAACCACTCTCATAATCTTGAACATTGTTGGAGTTGTAGCTGGTGTGTCTGATGCAATCAACAATGGATATGGATCATGGGGTCCCTTGTTTGGGAAGCTATTCTTTGCATTTTGGGTCATTGTTCACTTATATCCTTTCCTTAAAGGTCTCATGGGGAAACAAAACAGAACTCCTACTATTGTGGTTCTTTGGTCAATTCTTTTGGCTTCTATTTTCTCATTGATTTGGGTTAGGATTGATCCTTTCTTGCCAAAGCAAACAGGTCCAATACTCAAACAATGTGGTGTAGAATGCTAA 3012 0.4389 MRSDRRKTERCSGHAKFVHSLYASPAMNMRGVKGTSAALNATLAISAKKVVLELLEMRRRILMQRILMMSFRLRTILMMLMQNLLLIMEMFSFVLYIFSDLVYCFIVAGKDFEGDKEFYSNEEWQERVEKWKVRQEKKGLLNKEEEKEQVEDDDYLLAEARQPLWRKVPIASSLINPYRIVIVMRLVILAFFFRFRILTPAYDAYPLWLISVICEIWFAMSWILDQFPKWFPITRETYLDRLSIRFEREGEPNQLCPVDVFVSTVDPLKEPPIITANTVLSILSVDYPVEKVCCYVSDDGASMLLFDSLAETAEFARRWVPFCKKYKIEPRAPEFYFSEKIDYLKDKVQPTFVKERRAMKREYEEFKVKINALVAKAQKKPEDGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPRLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKALREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCFCCGGSRKSKSKKKSGAGSGLLGALYNNKKKKMMGKNYVRKGSGSMFDLEEIEEGLEGYEELEKSSLMSQKNFEKRFGQSPVFIASTLMENGGLPEGTNSQALVKEAIHVISCGYEEKTDWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEICLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVTIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDTEFGELYMFKWTTLLIPPTTLIILNIVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQCGVEC 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01088 1003 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 112 1003 - -
Adu04g01088 1003 SUPERFAMILY Nucleotide-diphospho-sugar transferases 271 806 IPR029044 -
Adu04g01088 1003 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 369 549 IPR029044 -
Adu04g01088 1003 Pfam Cellulose synthase 258 996 IPR005150 GO:0016020|GO:0016760|GO:0030244
Adu04g01088 1003 Coils Coil 356 376 - -
Adu04g01088 1003 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 112 1003 - -
Adu04g01088 1003 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01088 Adu-Chr4 20536730 20541537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01088 244 1003 Glycosyltransferase AT5G44030 84.286 0.0 1349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01088 K10999 - gmx:100781996 1651.72