Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01070 ATGCCACCGCCGCCACCAGCACCAGATCTTCCTGGGTTTTACTATGACCCTGAGAAGAATAGGTATTTCCCCATCAAAGGTCCCATACCAGGCTCTTCTCATTCTTCATCTTCATCTTCAAAGCATGCTACTCACAAAGCATCCCAAACATCTTCAACTCAGGAAAAGAGTAGGAGTTGTTGCAGGAAGCTTAGAAGCAGAACCTCCAAGTTGATTCAGGCTAGGGAGATAGATGGTCATCGTGTCATTGCTTCCCACAATTACAAGTGTAACTTCACTGAGGAGTTTAGGAAAATACAAGCATCACAGCCTTCGGTATGGAAGTATAAGGGAACAGATAAGATTGGTATTAGTGCTTTGAAACAAGTGCATGTCCGTGTGCAGACATTTGAGGGTGAATGTGATAGTGATATTATATTGACAGGCAGCACCAATGGCTCATTCAGTCTTTGTGAAGTTGGAAGGGATGGGGGATATTTTGATGGTGAGGTTAAGTGGACGCCCGATTGTGTGAAGAATTATGCTAAAGGGAAAACTGATGAGAATAATGTGGTGCCTGGTCCAGTTTCAAGACCTACTGGAGGGTCCGTGGTTATGTCATCTGGTATATCTTGCATAAGATCAGGCCCGGAGTGTTCTTCTCATGCTGCAAATGGCGGTCCTATTGTTGGACATGCATTGTTTACAACTTTGGGTTCAGAGACATCCGGTGGGTCAATTTATTCTCTTGGCCTTGTGGAATCATTAGATCTTGGGTCAGGTATACTGAACACATGGAGCAGACTGGATGAAGTTGCTTCTTTCAAGTGTACCATTTGGACAGCAGAATATGATTATAGTAGACATCGGGCTATAATTGGTACCAACATGGGAGCTGCATTGGTGGATTTGGCAACTGGGAGGAGATCATGGTTTTTACGATGTAAAAGTGATATCTTTGCACAGCAGATTGTTAATTCAGTAAGTTTCTGTATTTATTCATCTTTTATCTTAGATTTTTTTTACCCCATTGTTTACTTCTTCTCTCATGAGAAAAGAGAAAGAGTCTCGCGAACACTTATTGAACATAGGATACCTTATGCATCACCAAATAAGAAAGTTCGAAATTCTAGTAAAGAATGGTTCAAGCTCAGTGGAGATATAGACCCTTCTCTTACCATTAGAATGCCTTCATCTATATCCAGTTTGGTATCACTTCAGTATGATGATCAGTACTTCTTGGCAAGCTCCATGGACGGAACGATGAGGCTCTATGATCTTCGCCTGCTTCAGAGAGGTTCTGTTCAATCTTATGAAGGGCATGTGAATTCCCATTCGCGTATACAACTCGGTGTTGACCCAGATGAGAGATTTGTTATGTCAGGTGGAGAGGATCGCAACCTACGGTCGTGGAGTATCAAAACTGGCAAACTTCTTTTTGAGGAAAAATTCTGTGATTCAGTTCTCTCCAGTGTTTGCTATCAATCATGTAAAGGGTTTAAAGATGAGGATGAAAAGAACCAACACAAGCATGAATCTTGTATGAGTGCATGGCTTGGATCACATGATGAAGGACTATTTTATATGCGCTGGTTATGTGTGTGA 1584 0.4192 MPPPPPAPDLPGFYYDPEKNRYFPIKGPIPGSSHSSSSSSKHATHKASQTSSTQEKSRSCCRKLRSRTSKLIQAREIDGHRVIASHNYKCNFTEEFRKIQASQPSVWKYKGTDKIGISALKQVHVRVQTFEGECDSDIILTGSTNGSFSLCEVGRDGGYFDGEVKWTPDCVKNYAKGKTDENNVVPGPVSRPTGGSVVMSSGISCIRSGPECSSHAANGGPIVGHALFTTLGSETSGGSIYSLGLVESLDLGSGILNTWSRLDEVASFKCTIWTAEYDYSRHRAIIGTNMGAALVDLATGRRSWFLRCKSDIFAQQIVNSVSFCIYSSFILDFFYPIVYFFSHEKRERVSRTLIEHRIPYASPNKKVRNSSKEWFKLSGDIDPSLTIRMPSSISSLVSLQYDDQYFLASSMDGTMRLYDLRLLQRGSVQSYEGHVNSHSRIQLGVDPDERFVMSGGEDRNLRSWSIKTGKLLFEEKFCDSVLSSVCYQSCKGFKDEDEKNQHKHESCMSAWLGSHDEGLFYMRWLCV 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01070 527 ProSiteProfiles Trp-Asp (WD) repeats profile. 443 474 IPR001680 GO:0005515
Adu04g01070 527 MobiDBLite consensus disorder prediction 30 57 - -
Adu04g01070 527 SMART WD40_4 380 419 IPR001680 GO:0005515
Adu04g01070 527 SMART WD40_4 424 465 IPR001680 GO:0005515
Adu04g01070 527 PANTHER KATANIN P80 SUBUNIT 15 523 - -
Adu04g01070 527 Pfam WD domain, G-beta repeat 428 465 IPR001680 GO:0005515
Adu04g01070 527 Gene3D - 377 492 IPR015943 GO:0005515
Adu04g01070 527 MobiDBLite consensus disorder prediction 1 60 - -
Adu04g01070 527 SUPERFAMILY WD40 repeat-like 130 489 IPR036322 GO:0005515
Adu04g01070 527 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 15 523 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01070 404 488 Miscellaneous Gene Families AT5G08390 29.412 2.32e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01070 K11799 - gmx:100798753 657.521