Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01064 ATGACAACCGTGCTCTTCTCATCATTCACAGCTCACAATCCCAACTCCACCACCCTCCTCCTTTACAACCTTCATTATCTCCTACCTGGCGGTGGCGCTAGTGGCGGTGGCGCCCCTCCCCTCACGCTCCATCAACATTACCGCCGTCCTCTCCCCTTTCCCAGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGCTCCACACCTCTCTCCCTCCGCCCTCCCGGATGTCCTCCGCTACCACGTCCTCCTCCAATTCCTCTCCCTCTCCGACCTCCACTCCCTCCCTCCCTCCGGCAAGCTCTTCACCACTCTCTTCCAGACCACTGGCCGCGCCCCCTCCAACTCCGGCTCCCTTAACCTCACCCGCGACCCTCGAAACGGCATCGTTACGATCACTTCCCCTTACTCCCCTTCCTCAAACGCCACCGTTTTGTCCTTAGTCAAAACCTTACCTTATAACGTCACCGTTTTCTCCGTTGATAACCTCATCCTCCCTTTCGGCCTCGATCTCATGGCCTCGGAGACTCACCCCAATCTAGGGCTCAACATCACCAAGGCCTTAATCGACGGCAAGAACTTCAACGTCGCCGCCTCCATGCTCGCAGCCTCGGGCGTCGTCGAAGAATTCGAGGCCGACGAGGGCGGCGCTGGAATTACTATGTTCGTCCCCGTCGACGATGCATACGCCGATCTGCCTCCAGCCGTTAGCTTGCAATCCCTTCCGGCGGATAAGAAAGCCGTCGTGCTCAAATTTCATGTGCTGCATTCGTATTACCCCTTGGGATCGTTGGAATCGGTGGTGAACCCTCTTCAGCCGACGCTCGCGACGGAGGCCATGGGTGCTGGGAGCTTCACGCTCAACATTTCCCGCGTGAACGGCTCCGTTGCGATCAACACTGGGATCGTGCAAGCTTCCGTGACGCAGACGGTGTTTGATCAGAACCCCGTGGCAATCTTCGGCGTCTCGAAGGTTCTGCTGCCGAGGGAGATCTTCGGGAAGAATCCGATCACGACGCCGAAGCTTGGATCGACTGCACCGCCTCCGGAAGACGATGCGCTGTCACCAGAGGGGTCGCCGGGGGCAATGGATGGCCAGCCTTCGCACCTCTCATCGCCGCCCGGGGTTTTGTATTTAGTGGTGTTGCACACACGAATTATCTCTGCCTTATCGAGCGGCATATTTCAGTTGGCTTCTGCAGGATACCTCAGTTCTCATCCACGCTGGAGTTTGGCAGTTTGCTCGACATCTTACCTTGATGACCATCAGCTTTTGCTGCAGAGAACTGTATTGGGAATTCTTGTTGTAGCTTTATCTGTTTTAATATACTAA 1341 0.5488 MTTVLFSSFTAHNPNSTTLLLYNLHYLLPGGGASGGGAPPLTLHQHYRRPLPFPRXXXXXXXXXXXXSAPHLSPSALPDVLRYHVLLQFLSLSDLHSLPPSGKLFTTLFQTTGRAPSNSGSLNLTRDPRNGIVTITSPYSPSSNATVLSLVKTLPYNVTVFSVDNLILPFGLDLMASETHPNLGLNITKALIDGKNFNVAASMLAASGVVEEFEADEGGAGITMFVPVDDAYADLPPAVSLQSLPADKKAVVLKFHVLHSYYPLGSLESVVNPLQPTLATEAMGAGSFTLNISRVNGSVAINTGIVQASVTQTVFDQNPVAIFGVSKVLLPREIFGKNPITTPKLGSTAPPPEDDALSPEGSPGAMDGQPSHLSSPPGVLYLVVLHTRIISALSSGIFQLASAGYLSSHPRWSLAVCSTSYLDDHQLLLQRTVLGILVVALSVLIY 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01064 446 Gene3D FAS1 domain 185 332 IPR036378 -
Adu04g01064 446 SUPERFAMILY FAS1 domain 191 331 IPR036378 -
Adu04g01064 446 SUPERFAMILY FAS1 domain 71 169 IPR036378 -
Adu04g01064 446 SMART fasc_3 223 332 IPR000782 -
Adu04g01064 446 MobiDBLite consensus disorder prediction 341 372 - -
Adu04g01064 446 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 71 380 - -
Adu04g01064 446 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 71 380 IPR033254 -
Adu04g01064 446 Pfam Fasciclin domain 196 331 IPR000782 -
Adu04g01064 446 ProSiteProfiles FAS1/BIgH3 domain profile. 184 329 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01064 Adu-Chr4 19610862 19613191 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01064 - - aip:107639086 606.29