Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01048 ATGGCTGCTTTGTATTCCAGTGTCACAGAGGAGGATCTGAACGGTTTTAGGTTCTCAATCGATCAAATTCAAACCCAAGTTGTCAAGCTAGAGAAACAAGTAAATGAAGTTGAACAGTTCTACCAATCCAACGATTTTAAAGTTAATAATTCCAAAAACAAGGGTGAAAATAAGCATCTTATTGGAACTAAGAAGTCACTGCAAGGTGATTCACACAATGAAGCTGATGCTGATGCTGCAAAAGGAAGGGAAGAACTCATGCGCCAGTTTTCCGTTATATTGAGTCAGGTAATTGCTAATACTCTACAACTACTTTTTAATTGTGATGCATTCATTGCTTCACAGATTACTCAGCATGAATGGGCTTGGCCTTTTATGGATCCAGTAGATGTTGAAGGTCTGGGACTGTATGACTATTATGAGGTTATCAATAAGCCTATGGATTTCAGCACAATAAAAAGAAAAATGGAAGCTAAGGATGGCTCTGGTTATAAGAATGTCAGGGAGATATATTCTGATGTAAGGTTGATTTTTAAGAATGCAATGAAATACAATGATAAAAAGAATGAAGTCCATGTTATGGCGAGAACCTTGCTGAACAAGTTCGAAGAGAAATGGCTGCTTCTGTTGCCTAAAGAAGAAGCAGATGCACAGTTGGAAACACAGCTTGCACAAGAAGCAACTTATGCCAATATGACTAGGGATTTATCTGTTGAGCTGGACAAGGTTGATGTGCATTTGAAGAGTCTTAAAGCATTGGTTATTCAAAACTGCAGGAAACTCTCATCTCAGGAGAAAGTTCTACTTGGGACAGCTCTCCCAAGGTTGTCTCCTGAATACCTCATCAGAGCATTGCAAATAGTTCATGAAAACAATCCAAACTTCCAACCTAATGCTGAAGTTGTGGAACTTGACATTAATTCTCAGAACGACTACACACTGTGGAGGTTAAACGTTTTTGTCAAGCATGCATTGAAAGTTCAGGGAAGAACTGCTGAAGGCACAGGTGTTGACCATAGTAATAAAACCGAGAACAAGAACTACTCCAAAAGGAGGAGAGTTTTGTGA 1068 0.3895 MAALYSSVTEEDLNGFRFSIDQIQTQVVKLEKQVNEVEQFYQSNDFKVNNSKNKGENKHLIGTKKSLQGDSHNEADADAAKGREELMRQFSVILSQVIANTLQLLFNCDAFIASQITQHEWAWPFMDPVDVEGLGLYDYYEVINKPMDFSTIKRKMEAKDGSGYKNVREIYSDVRLIFKNAMKYNDKKNEVHVMARTLLNKFEEKWLLLLPKEEADAQLETQLAQEATYANMTRDLSVELDKVDVHLKSLKALVIQNCRKLSSQEKVLLGTALPRLSPEYLIRALQIVHENNPNFQPNAEVVELDINSQNDYTLWRLNVFVKHALKVQGRTAEGTGVDHSNKTENKNYSKRRRVL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01048 355 PANTHER OSJNBA0053K19.4 PROTEIN 6 98 - -
Adu04g01048 355 ProSiteProfiles NET domain profile. 251 332 IPR027353 -
Adu04g01048 355 PANTHER TRANSCRIPTION FACTOR GTE1-LIKE ISOFORM X1 109 352 IPR017413 GO:0005634|GO:0006355
Adu04g01048 355 PANTHER TRANSCRIPTION FACTOR GTE1-LIKE ISOFORM X1 6 98 IPR017413 GO:0005634|GO:0006355
Adu04g01048 355 Gene3D - 255 331 IPR038336 -
Adu04g01048 355 Coils Coil 20 40 - -
Adu04g01048 355 MobiDBLite consensus disorder prediction 331 355 - -
Adu04g01048 355 Pfam Bromodomain extra-terminal - transcription regulation 261 322 IPR027353 -
Adu04g01048 355 SUPERFAMILY Bromodomain 105 214 IPR036427 GO:0005515
Adu04g01048 355 MobiDBLite consensus disorder prediction 337 355 - -
Adu04g01048 355 SMART bromo_6 97 211 IPR001487 GO:0005515
Adu04g01048 355 Pfam Bromodomain 113 196 IPR001487 GO:0005515
Adu04g01048 355 ProSiteProfiles Bromodomain profile. 117 192 IPR001487 GO:0005515
Adu04g01048 355 PANTHER OSJNBA0053K19.4 PROTEIN 109 352 - -
Adu04g01048 355 PRINTS Bromodomain signature 173 192 IPR001487 GO:0005515
Adu04g01048 355 PRINTS Bromodomain signature 136 152 IPR001487 GO:0005515
Adu04g01048 355 PRINTS Bromodomain signature 120 133 IPR001487 GO:0005515
Adu04g01048 355 Gene3D - 48 227 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01048 Adu-Chr4 19255842 19259332 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01048 - - lja:Lj0g3v0059669.1 380.178