Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01022 ATGGTTGAAAGTGTATTAAAGAAAGTAAAACTTAGATCCCCAAACCTCATTCATAGACTCTATGAAGAAGCAGGGGTTGAGCTTGATGAAGATGTGTTCAATCAGATTGGATCACCCAATTACACACAAATGAAAAGAGTGATGCTCATCCCACGTATGCAAAGGCCAAGGCTACTAAGAAGGGAAGCTCAACAACTGCCTCCACCGCAACTAACTCAAGAAGCAGAATCCTCTATCCCTCAAGTCTTATCGCTACCACCTCCTAAATATTGGCAACAACTGACCATATCACTTGAGCAACTTAGGATGGAACAATTGAACCAAGGGAGACTCATCAATCATATCATACATGAACAAGAAAATCAATGGGATATACTCGAAAATTTCAAGCAAGTCATGGAGTGCAAAGTGAACTACCTAGCTATGCCAAACTTAGGCCCCAAACTTCACAAATCTTTGGCGTGCAACACGCCAAGACAAGGGCATGCCACACGCCCAAGTGGAGTTCCCAGGATTCAAGCATTGGAGGTGGTGTGCAACACGCCAGGACAGGGGCATGCCACATGCCAAGATGAGCTCTCATTGATTCAAGATTTGAGAGGCTCAATACAAGGCAGTTCAAGCAAGAAAGTGGTCGTGCAACACGTGAAGGTTGGGAATGCTACATGCCCAAGGAAGGGCTCCCAGGCCAAGAAAGGAATCAACAAGGGTGTGACATTTCTACACACCTTCGAAGCCTCATCCAATGTTAAAAATTGGCGTGCAACATGTCAAGAAGTGGGCGTGCCACACGCTACAGATGGTTACTCCCAGGGACTTGAAGAAATTGGCGTGCAACATGTCAAGGAGCGGGTGTGCCATACGCCCAAGGAGCTGCTTCCTAGGGGCTTGAAAAGATTGGCGTGCAACACTTCAATGGGTGGGGTGCCACACGCCCAAGGCCCAAGAATCCACAAGCACTTTAAACAGTCTTCAATTCAATTCAACCAATCAAATACCGTTTTTCTTTCTCTCTCTAAATGCCTGCGTCCTTCTCCATTGCCTCCTTCCCCGTCCTCGATTGTCGGTGGTAGTTGGAAAAGGGAAGAGAGTATGGCAATGGAGGAGGAAGAGCCGAGCCAGCTGAAGAGAGCGTTGATTGATTCCTCTGCTGGAGCTATTTCTGGTGCTATATCAAGAACAGTTACCTCTCCCCTTGATGTTATTAAGATTAGGTTCCAGGTTCAACTCGAGCCCACATCTTCATGGGCTTTACTACGCAAGGAAATTTCTGCACCATCAAAATATACTGGCATGCTTCAAGCAAGCAAAGATATCTTTAGAGAAGAAGGCATACGGGGTTTTTGGCGGGGCAATGTACCAGCTTTGCTCATGGTTATGCCATATACATCCATACAGTTCACAGTTTTGCACAAGTTAAAATCTTTTGCCTCTGGTTCTTCCAAATCAGAGAATCACATTAATTTGAGCCCTTATCTATCCTATGTGAGTGGGGCATTAGCTGGGTGTACAGCTACTGTAGGATCATATCCTTTTGATCTCCTTCGAACCATATTAGCTTCTCAAGGTGAACCGAAGGTTTATCCAAACATGAGGTCAGCATTCGTTGACATTGTTAAGACTCGTGGTTTCTCTGGCTTGTATGCCGGACTGTCACCAACGCTAGTTGAGATTATACCTTATGCAGGCCTACAATTTGGTACTTACGATACGTTTAAACGTTGGGCTATGGCATGGAACCACACTCAATACTCAAATGCTATTGGAGAAGATAGCCTATCTAGCTTTCAACTTTTCCTGTGTGGGTTGGCTGCTGGTACATGCGCTAAGCTTGTTTGTCATCCACTTGATGTAGTCAAGAAAAGATTTCAGATTGAAGGTCTGCAAAGGCATCCAAGATATGGAGCTCGTGTGGAACACCGTGCGTACAGAAACATGTTTGACGCCATGAAACGGATATCACAGGCAGAAGGTTGGGCTGGTCTGTATAAGGGGATCATCCCATCAACTGTTAAAGCTGCACCAGCTGGTGCTGTAACATTTGTAGCATATGAATTGACATCAGATTGGCTCGAGTCAATTTTGACTTGA 2091 0.4524 MVESVLKKVKLRSPNLIHRLYEEAGVELDEDVFNQIGSPNYTQMKRVMLIPRMQRPRLLRREAQQLPPPQLTQEAESSIPQVLSLPPPKYWQQLTISLEQLRMEQLNQGRLINHIIHEQENQWDILENFKQVMECKVNYLAMPNLGPKLHKSLACNTPRQGHATRPSGVPRIQALEVVCNTPGQGHATCQDELSLIQDLRGSIQGSSSKKVVVQHVKVGNATCPRKGSQAKKGINKGVTFLHTFEASSNVKNWRATCQEVGVPHATDGYSQGLEEIGVQHVKERVCHTPKELLPRGLKRLACNTSMGGVPHAQGPRIHKHFKQSSIQFNQSNTVFLSLSKCLRPSPLPPSPSSIVGGSWKREESMAMEEEEPSQLKRALIDSSAGAISGAISRTVTSPLDVIKIRFQVQLEPTSSWALLRKEISAPSKYTGMLQASKDIFREEGIRGFWRGNVPALLMVMPYTSIQFTVLHKLKSFASGSSKSENHINLSPYLSYVSGALAGCTATVGSYPFDLLRTILASQGEPKVYPNMRSAFVDIVKTRGFSGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNHTQYSNAIGEDSLSSFQLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYRNMFDAMKRISQAEGWAGLYKGIIPSTVKAAPAGAVTFVAYELTSDWLESILT 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01022 696 ProSiteProfiles Solute carrier (Solcar) repeat profile. 489 575 IPR018108 -
Adu04g01022 696 PANTHER SOLUTE CARRIER FAMILY 25 371 695 - -
Adu04g01022 696 PRINTS Mitochondrial carrier protein signature 394 408 IPR002067 GO:0055085
Adu04g01022 696 PRINTS Mitochondrial carrier protein signature 504 522 IPR002067 GO:0055085
Adu04g01022 696 PRINTS Mitochondrial carrier protein signature 451 471 IPR002067 GO:0055085
Adu04g01022 696 PRINTS Mitochondrial carrier protein signature 548 566 IPR002067 GO:0055085
Adu04g01022 696 PRINTS Mitochondrial carrier protein signature 602 624 IPR002067 GO:0055085
Adu04g01022 696 PRINTS Mitochondrial carrier protein signature 381 394 IPR002067 GO:0055085
Adu04g01022 696 Pfam Mitochondrial carrier protein 490 576 IPR018108 -
Adu04g01022 696 Pfam Mitochondrial carrier protein 593 691 IPR018108 -
Adu04g01022 696 Pfam Mitochondrial carrier protein 382 477 IPR018108 -
Adu04g01022 696 SUPERFAMILY Mitochondrial carrier 377 685 IPR023395 -
Adu04g01022 696 Gene3D Mitochondrial carrier domain 373 693 IPR023395 -
Adu04g01022 696 ProSiteProfiles Solute carrier (Solcar) repeat profile. 376 476 IPR018108 -
Adu04g01022 696 ProSiteProfiles Solute carrier (Solcar) repeat profile. 593 690 IPR018108 -
Adu04g01022 696 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 371 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01022 Adu-Chr4 18417615 18428249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01022 368 696 Organic Solute Cotransporters AT3G21390 75.375 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01022 K15108 - gmx:100803750 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01022 04 18417615 18428249 Adu04g01022 04 18417615 18428249 ECH
Adu01g02658 01 95960386 95963421 Adu04g01022 04 18417615 18428249 PCT