Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01010 ATGGATTCAAAACCTCCATTGAAGTATCAGACATGGTTCTTGAAAGTTTCTATCCACTGTGATGGTTGCAGGAGGAAAGTTAAGAAGGTTCTACAAAGCATTGATGGTGTTTTTACAACAATAATAGACCAACAACAGCAAAAAGTAACCGTCACTGGAAGTGTAACTGTTGAAACCCTTCTCAGTAAACTTCTCAGAGCCGGTAAGCACGCCGAGATTTGGCCGGAAAATATCTCCGTCAAAGAGAACAAGAACAAGAGCAACACACACAAGTTGGAAAACGATAACCATTCTTATGCTGAAAAAACTACACAAAATTGTAACAAAGTTATGAGCAAGAGCAGCAACATAAAACCCGGTCAAAAATCACCGGAAAAGTCTCCGGCCGGCGACCGTGAATCGCCGCAGGAGCACAAGGGTAGCCAGAGTGGTGGTGGTGGTGGTTCTGCTAAGAAGAAGAAAAAGAAAGGTCAGGGTGATGTTAGCGTGGATCATGGTTCCGCGGGTGCACCTGCACCTGCGGACGCTGGATTTGGGTTCCAGAATCAAGGGCTGGATTTTGGACGGGAAATGGGGAAAATGTACAATAGATTGTACCCCATGGGTGGTCCTTCATACTATGTTCCTCCTTATAATATCATGTGTTCAGGACTAGATCAAGAATATGGTTGTCAAATTCAATCAAGACCGTTGGTTTCCTTTGAGATTTTCAGCGATGAAAATTCGCGCGCGCCTTCGTTGCGCTCTTCGTCGCCGGCGGCAGAAGCAGCAGGTTCAGGGGCTCGTCATCTTCTTGCTTCGAGTGTCGCCGTCAGCCTCCTTCTCTTGTTTGTTTTGTGGACCCTTGTTGCAGCAATTCCCTGCCAGGACAGGGGTCTAAACATTCACTTTTCAGTCTCACGGCAATTTTCTTGGAGCGTGCCGGTTAACACCCTTTATGAACGGATCATGGAGGAGTCAAAGAAGCGAGATCGCCGGAACTCAAATGGATTGTTGAAGGAGATATATCGAGTTGAGCTATGTACCCGTCACTTGACAGACTTGGTGGATTCACCTCAATTTCCCTTGACAGAGGATCAGGAAATGGAAATTGAACAGGACATGAAGGAGCTCACTCAAGTTTGTGAAGCTTTTAGAGTTGGACTGGATCCACTGGAGCGCCAAGTGAGGGAGGCATTCCGGAAGATTATGACGTGCCGAACTGAGGGTCTTGATTACCTTGGCTCATCCAGCTATGCAGATCAATGA 1248 0.4655 MDSKPPLKYQTWFLKVSIHCDGCRRKVKKVLQSIDGVFTTIIDQQQQKVTVTGSVTVETLLSKLLRAGKHAEIWPENISVKENKNKSNTHKLENDNHSYAEKTTQNCNKVMSKSSNIKPGQKSPEKSPAGDRESPQEHKGSQSGGGGGSAKKKKKKGQGDVSVDHGSAGAPAPADAGFGFQNQGLDFGREMGKMYNRLYPMGGPSYYVPPYNIMCSGLDQEYGCQIQSRPLVSFEIFSDENSRAPSLRSSSPAAEAAGSGARHLLASSVAVSLLLLFVLWTLVAAIPCQDRGLNIHFSVSRQFSWSVPVNTLYERIMEESKKRDRRNSNGLLKEIYRVELCTRHLTDLVDSPQFPLTEDQEMEIEQDMKELTQVCEAFRVGLDPLERQVREAFRKIMTCRTEGLDYLGSSSYADQ 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01010 415 MobiDBLite consensus disorder prediction 82 98 - -
Adu04g01010 415 MobiDBLite consensus disorder prediction 82 178 - -
Adu04g01010 415 PANTHER BPS1-LIKE PROTEIN 267 411 - -
Adu04g01010 415 PANTHER PLANT/F1M20-13 PROTEIN 267 411 - -
Adu04g01010 415 CDD HMA 14 72 IPR006121 GO:0046872
Adu04g01010 415 MobiDBLite consensus disorder prediction 99 122 - -
Adu04g01010 415 Gene3D - 8 73 - -
Adu04g01010 415 Pfam Protein ROH1-like 265 407 IPR008511 -
Adu04g01010 415 Pfam Heavy-metal-associated domain 16 67 IPR006121 GO:0046872
Adu04g01010 415 ProSiteProfiles Heavy-metal-associated domain profile. 17 73 IPR006121 GO:0046872
Adu04g01010 415 SUPERFAMILY HMA, heavy metal-associated domain 8 75 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01010 Adu-Chr4 17829810 17836550 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01010 - - adu:110280432 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01010 04 17829810 17836550 Adu04g01010 04 17829810 17836550 ECH
Adu01g02654 01 95852811 95854493 Adu04g01010 04 17829810 17836550 PCT