Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g01001 ATGCTAACTCGCTGCCTCGGCGCCCGGCGGCTCCGTCAGATCCGCCGCGCCTTCCGCCACGGCGCCGTCACGTTCCTCTGCTTATTCCTCACCGTCATCGTCCTCCGCGGCACCATTGGCGCCGGCAAGTTTGGAACCCCTCAACAAGACTTCGACAATCTCCGTCACCACCTCAACTCTCACCGCCGCGTCCTCGAAGAACAACACTCAGAAAAAACCACCACCACCAGCAACAACTACGCCACCTTCGATATCTCCACGATCCTCGTCGACGAGCCACCCAGCAAGGACGAAATAACCCGCGATCCAAAGGCGCCATACACATTAGGTCCCAGAATCACCAATTGGGACCAACAGCGCAAAAGGTGGCTCCAACAGAACCCTAATTTCCCAAATTTTATCGCTCCGAACAAACCTCGCGTCCTTCTCGTAACAGGTTCGTCTCCAAAACCGTGCGAGAATCCCGTCGGTGACCACTACCTTCTGAAATCCATTAAGAACAAAATCGATTATTGCAGGCTCCACGGGATCGAAATCTTCTACAACATGGCGCTATTTGATGCAGAAATGGCAGGGTTTTGGGCCAAGCTTCCGTTGATTCGGAAGCTGCTCTTGTCGCACCCTGAGGTCGAGTTTCTATGGTGGATGGATAGTGACGCCATGTTCACGGATATGGCGTTCGAGGTTCCGTGGGAGAGGTACAAAGATCACAACTTTGTGATGCATGGTTGGAATGAGATGGTGTATGATGAGAAAAATTGGATTGGGTTGAACACTGGTAGTTTCCTTCTAAGGAATTGTCAATGGTCATTGGATATTCTTGATTCTTGGGCTCCAATGGGACCAAAGGGGAAAGTTAGGGATGAAGCTGGGAAATTGCTAACTAGGGAGCTCAAGAACAGGCCGGTTTTCGAAGCAGACGATCAATCCGCAATGGTGTATCTACTTGCAACTGAGAGGGATAAATGGGGTGACAAAGTGTACCTTGAGAATGGTTACTACTTGCATGGCTATTGGGGAATTCTTGTGGATCGTTATGAAGAGATGATTGAGAATTATCACCCTGGTCTTGGTGATCATAGGTGGCCACTTGTGACACATTTTGTTGGGTGCAAGCCTTGTGGTAAGTTTGGAGATTACCCTGTTGAGAGGTGTTTGAGGCAGATGGACCGTGCATACAATTTTGGTGATAATCAGATTCTGCAGATGTATGGTTTCACTCATAAGTCTCTTGCAAGTAAGAGGGTGAAGAGAGCTATCAGGAATGTTAATCCAGTGAATCCAATCTAG 1290 0.4915 MLTRCLGARRLRQIRRAFRHGAVTFLCLFLTVIVLRGTIGAGKFGTPQQDFDNLRHHLNSHRRVLEEQHSEKTTTTSNNYATFDISTILVDEPPSKDEITRDPKAPYTLGPRITNWDQQRKRWLQQNPNFPNFIAPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRLHGIEIFYNMALFDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNFVMHGWNEMVYDEKNWIGLNTGSFLLRNCQWSLDILDSWAPMGPKGKVRDEAGKLLTRELKNRPVFEADDQSAMVYLLATERDKWGDKVYLENGYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLRQMDRAYNFGDNQILQMYGFTHKSLASKRVKRAIRNVNPVNPI 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g01001 429 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 422 IPR008630 GO:0016021|GO:0016757
Adu04g01001 429 Pfam galactosyl transferase GMA12/MNN10 family 138 377 IPR008630 GO:0016021|GO:0016757
Adu04g01001 429 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 137 292 IPR029044 -
Adu04g01001 429 PANTHER - 4 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g01001 Adu-Chr4 17590581 17592686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g01001 1 417 Glycosyltransferase AT3G62720 76.923 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g01001 K08238 - gmx:100818287 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g01001 04 17590581 17592686 Adu04g01001 04 17590581 17592686 ECH