Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00987 ATGATAGACCTCAAGTACATTTGGGTTCTTGTTTCAATCAACAGATACATTCATGAAACCTTGTCAAATGAGAGAACAAGGAATGCTCTAAAGCTGAAATGCACCTCAAAACTAAGGATTCAAAAGCAAGAGTTCTTTGAATTCTCTGAGCAATCAGTGCTATCAAATTTGTACTGGGGAATTGACAGCATTGAAGCTGCAATTCAAGCTCAGAAGCCAGAGGAAAAGTCCTTCAGGCTCATGAACTCAGAACAAATGCTTCAGGTACCAGCAATGCTTGATGAGGAAGAAGTAACCGCCACGGTTTCAAACCGTTACTTGGTGTGCTGCTCCTATTTTTACCTCTCAGTTGTTAGGAACCTGCAGGGTGATGAGTGGCAATCTGCACTGCATTTTCTTCAAGCTGTGTTGGTGTCACCAAGGATTGTTTGCAATGAATTTGCAACTGAACTCTCTCAGAGCCTTTTCCCTCAAGAAACCATCATGTTGCTGAGAAGGAAGAAGCAGAATGTGAAGAACAACAGTGGAAGCATGAGTTCTAGTTCTGAGGATGAAGTGAATGAAGCAATTAGGGATATTGCAAGAAGTTATAAGGAAGGTTTGGTGTATTATCAGGTTATGCTTTATGGAGAGAATCCATGGTGGAGAAGTTATTGCAGCACCAAACACCAATCACCACAATATGTGGACGCACCAAATACCAGCTGTGTTTCTCCTAATTCATTTCAACATGAACCAAGATTGAAAACCTGCAATATGTATGATAAAGTTCATCCACTTGGTCCCCAAGATGTGATGCATAATATGGAAGACAGAAAATTTCACATAAGAGCCAAAATAACAAAAGCAAATGATCTACAGAGAGAAACTTATGACAGGAAGCTACATCAATCCTATGCCTTGGATCATGCTGTGAAATATTCCGGGCAAGAACAGCTGAATGAAAGAAGTGTGGTTAATTTTGATTCGACCATATTCAACAGAGCCAGGGAAGATTCTACTTTATCCATCTCAAATTTCCATGTAGATGATGGAATAATTGAGGAAGCATTGCAGCCACTAAAATTCCATCTCTTTGACAATGTAACATCTAAATCTCCTTCCAAACATTGGCTCAGCCAGAAAGATCATGAAGAAAGTTCTAAAACAAAATCACGAAGATATTCCCTACAGGATCTTTCAGGAGTGATTCAAAGAATCTCAGAACTGCATTATTCAGAAGCATTAGGAAAGTGTGGACAAGAATATACGGTTGACATTGCATCTATCTATGAGTATTTGACCGATTCATCAGGCGCTAGTTATGCTTCCTTGAGGGATGCCATCTTGGATGAACTGCTAGTAGCTATCTCAACATCCAAAGAGGAAAGAGAAATTAGAGCTTCTGTGTCTATTCTCACTACAATAATTTCAAGAAACAAATCAGTCATAGAAGACATCAAGAAGAAAGGTTTAAAGTTGTGTGATCTTGCTAGTGCTCTAAAACAAAATGTTCATGAGGCTGCAATTCTCATCTATTTGATAAATCCATCACCTATAGACATAAAAACATTGGAACTTCTACCAATACTTGTTGAGATTGTATGCACCTCACATAGTTACAAGAATAAGCCAGAGCCCCTTCTTCTGACGCCTCATGCAGCATCATTGATGATCATTGAAGAACTAGTGACTTCGTTCGACTATGCAACAAATAACATGCATTTGGCTGCGATCAGTTCCCCTCATGTTCTCAGTGGACTTCTAGAAGTTGCTAGGAATGATAATCTAGAAGAGTTTTTCTCTTTAACCACCATTCTTATAAAATGCATGCAGTTTGATGCACAATGTAGACAGTATGTATCACAATACACTCCTCTTGCTCCTTTTATCCATCTTCTGCAGACGGAAAATACCCGCGCCAAATGCATGGCACTTGAATTTTTCCATGAAATCCTTTGCATACCGCGATCATCAGCCATTAATCTGTTGCAGCGTATACAGAAAGAAGGAGGCATCAATGTTATGCAGATACTAAGGATTTGTACTCATCAATTACAACCTGATCACCAGCTTTTTGCAGCAAACATACTACTTCAGTTAGAAACATTGAACCCATGTGATAAAAGCTTGTTCAGAGTAGAAGCAGTGAAGGTCCTTCTAAGGGCATTGGTATCTCAGGAAAGCTCAGAGCAGATATTATCTGCATCCATTTTATCAAATCTTGCAGGAACATATGCGTGGACAGGAGAACCATATACAGCTGCATGGTTGCTGAGGAAGACAGGATTGAACTCTCCCTATCACCACAATATGATAAGAAACTTCAACTGGTTGGATCAGAGTCTACAGGATACTGGCACAGACTTATGGTGCAGTAAAATTGCAAAATCTATGTTAAGTGTTGGAGATTCCATCTTCCATGCTTTAGAGAGTGGATTAAGAAGCAAGATGAAAATGGTCTCTAGAGATTGCCTTGTAGCAATTTCATGGCTCGGATGTCAAATATCTAAAAGCTCGGATAGCCTCAGATATTCGGCATCCGAGATCATACTGAGTGGAATCGAGCAATTCCTGCATCCTGGGATGGAGCTAGAAGAAAGACTTCTAGCATGTCTATGCATTTATAATTATGCCACTGGTAAAGGAAAGCAGAAACTGATTCATTTCTCTGAAGGAGTAAAAGAATCGTTACGACGTCTTTCAAATGTAACTTGGATGGCTGAGGAATTACACAAAGTAGCTGATTTCCTGTTGCCAAACATATCACGTATTTCTTGTGTTCACACACAAATCCTTGAGACGAGTCGAAACTTCAATGTAGCAGTTTGCTCCCTCATATACTACAAGGGACTCCTATTCAGTGGATATTCAGATGGTTCAATCAAGGTGTGGGATATTAGAGGGCACTCAGCTAGTCTTGTATGGGACATTAAGGAGCACAAGAAGTCCGTGACATGCTTTTCGCTATCTGAACCATCAGATAGCCTCTTAAGTGGATCCGCTGATGGAACCATAAGGGTGTGGAGAATGGTCCAGAGAAAGTTGGAATGTGTTGAAGTAATAGTCTTCAAGGAACCAATCCATCAGTTACATGCATCGGGTGAAACAATTTTCGCGATTACTGAAAGCCAAGGAATAAAGATAGCTAATGATTCAAGGGCAATCAGAAATATTTTCAAAGGTAAGCATGTAAAATGCATGACACTAACTAGAGGAAAGTTATACATTGGCTGCACAGATTCAAGCATACAGGAGTATTCCACAACATACAACAGGGAACAAGAAATCAAACCACCAACAAGGAGTTGGATCAAGCAAAGTAAGCCAATACATTCAATTGTAGCATACAGAGATTGGCTCTATAGTGCAAGTAAGCATGTTGAAGGCACAACATTCAAGGAATGGAAGAAAAAAATTGGGAAACCCAAAATTTCAATCCATTCTGACAAAGGAGATAGTATGATGGCTATGGAAGTGGTAGAAGACTTCATATACCTAATCTCCAGCTCATCTGCAAATAGCATTCAGATCTGGTTGAGAGGGACACCGAAAAAACTTGGGAGAATATCGGCCGGAAGCAAGATTACAAGCCTTCTCGCCGCAAATGACATTATTCTTTGTGGTACTGAGATGGGACAAATCAAGGGATGGATCCCTTTgacgccaactaaccccaaccagttgtttcttgggtgccccttcttcaagTTAAAAAATTCATCCCACTGCAAGTTTTTTGTCTGGATTGATGGTCATGTTGCGAAAATTGGGGTTACAGAAAAGTCAATTACTGACAACGGAGTTGACGACCTGGAACAGTACTTGTGCAAGAATAAAGTAGAATAG 3828 0.3932 MIDLKYIWVLVSINRYIHETLSNERTRNALKLKCTSKLRIQKQEFFEFSEQSVLSNLYWGIDSIEAAIQAQKPEEKSFRLMNSEQMLQVPAMLDEEEVTATVSNRYLVCCSYFYLSVVRNLQGDEWQSALHFLQAVLVSPRIVCNEFATELSQSLFPQETIMLLRRKKQNVKNNSGSMSSSSEDEVNEAIRDIARSYKEGLVYYQVMLYGENPWWRSYCSTKHQSPQYVDAPNTSCVSPNSFQHEPRLKTCNMYDKVHPLGPQDVMHNMEDRKFHIRAKITKANDLQRETYDRKLHQSYALDHAVKYSGQEQLNERSVVNFDSTIFNRAREDSTLSISNFHVDDGIIEEALQPLKFHLFDNVTSKSPSKHWLSQKDHEESSKTKSRRYSLQDLSGVIQRISELHYSEALGKCGQEYTVDIASIYEYLTDSSGASYASLRDAILDELLVAISTSKEEREIRASVSILTTIISRNKSVIEDIKKKGLKLCDLASALKQNVHEAAILIYLINPSPIDIKTLELLPILVEIVCTSHSYKNKPEPLLLTPHAASLMIIEELVTSFDYATNNMHLAAISSPHVLSGLLEVARNDNLEEFFSLTTILIKCMQFDAQCRQYVSQYTPLAPFIHLLQTENTRAKCMALEFFHEILCIPRSSAINLLQRIQKEGGINVMQILRICTHQLQPDHQLFAANILLQLETLNPCDKSLFRVEAVKVLLRALVSQESSEQILSASILSNLAGTYAWTGEPYTAAWLLRKTGLNSPYHHNMIRNFNWLDQSLQDTGTDLWCSKIAKSMLSVGDSIFHALESGLRSKMKMVSRDCLVAISWLGCQISKSSDSLRYSASEIILSGIEQFLHPGMELEERLLACLCIYNYATGKGKQKLIHFSEGVKESLRRLSNVTWMAEELHKVADFLLPNISRISCVHTQILETSRNFNVAVCSLIYYKGLLFSGYSDGSIKVWDIRGHSASLVWDIKEHKKSVTCFSLSEPSDSLLSGSADGTIRVWRMVQRKLECVEVIVFKEPIHQLHASGETIFAITESQGIKIANDSRAIRNIFKGKHVKCMTLTRGKLYIGCTDSSIQEYSTTYNREQEIKPPTRSWIKQSKPIHSIVAYRDWLYSASKHVEGTTFKEWKKKIGKPKISIHSDKGDSMMAMEVVEDFIYLISSSSANSIQIWLRGTPKKLGRISAGSKITSLLAANDIILCGTEMGQIKGWIPLTPTNPNQLFLGCPFFKLKNSSHCKFFVWIDGHVAKIGVTEKSITDNGVDDLEQYLCKNKVE 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00987 1275 MobiDBLite consensus disorder prediction 370 386 - -
Adu04g00987 1275 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 971 1004 - -
Adu04g00987 1275 ProSiteProfiles Trp-Asp (WD) repeats profile. 945 968 IPR001680 GO:0005515
Adu04g00987 1275 SMART WD40_4 922 959 IPR001680 GO:0005515
Adu04g00987 1275 SMART WD40_4 1133 1173 IPR001680 GO:0005515
Adu04g00987 1275 SMART WD40_4 964 1003 IPR001680 GO:0005515
Adu04g00987 1275 Gene3D - 420 914 IPR011989 -
Adu04g00987 1275 PANTHER OS04G0584500 PROTEIN 303 1214 - -
Adu04g00987 1275 PANTHER OS04G0584500 PROTEIN 7 267 - -
Adu04g00987 1275 Gene3D - 1080 1220 IPR015943 GO:0005515
Adu04g00987 1275 MobiDBLite consensus disorder prediction 364 386 - -
Adu04g00987 1275 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 303 1214 - -
Adu04g00987 1275 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 7 267 - -
Adu04g00987 1275 SUPERFAMILY ARM repeat 569 916 IPR016024 -
Adu04g00987 1275 Pfam WD domain, G-beta repeat 969 1002 IPR001680 GO:0005515
Adu04g00987 1275 ProSiteProfiles Trp-Asp (WD) repeats profile. 971 1004 IPR001680 GO:0005515
Adu04g00987 1275 Gene3D - 915 1065 IPR015943 GO:0005515
Adu04g00987 1275 SUPERFAMILY WD40 repeat-like 941 1211 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00987 Adu-Chr4 17037999 17046613 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00987 - - gmx:100789287 1829.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00987 04 17037999 17046613 Adu04g00987 04 17037999 17046613 ECH