Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00984 ATGCAGATCTTCATCTTCCGAACTAACGAGTGGGCAAAGCTTTGCAGTGTGATTCCGCGAGGGGATGGGGTGGGGGAACTTCCTGCAACTCTATTGATGATCAGTGATGGAAATCGTAAACGTCCGCGCGATTCTAGTCTAGCAATCCTCTACTTTGCATACAGAAGAAAAGCACCAATTTACTTGATAGACTTTACCTGCTACCGTCCACCTAGTTCTCATAGGCTACCTATTGCCATGTTTGAAGAGAATAGTGTCTTAGATGATTTAGATCCAGAGTCTGTTGCTTTCCAGTGCAAGATCATAGCGAAATCTGGATTCAGCGAGGAAACAGCCATTACTTCATCTTTAGCACAGATACCAAAAGTAAAATCTCTTGCCTTAGCCCTTGATGAGGCCGAAACCATAATGTGTTCAGCAATCTCAGACCTGTTTTGGAGAAACAACATCAACCCAAAATCCATCGACATACTAATCACCAACAGTTGTGTGTTCTGTCCTACACCATCTCTTAGTGCCATGGTGGTTAACAAGTTCAAGATGAGGAGCAACATCATGAGCTTCAACCTATCAGGTATGGGGTGTAGCGCCGGAATCATATCGGTGAGTCTGGCTAAGGACTTGTTGAGGGTTCATAGGGGCTCATTAGCTCTAATTGTGAGCTCAGAGACCCTTAATCTGAATTGGTACACAGGTAAAGTACACTCCATGTTGCTGACTAATTGTCTCTTCAGAATGGGTGGTGCTGCTATATTGATGTCTAGCAAGGTTAATGATAAACATAAAGCAAAGTATGAACTACAACATATTGTTAGAACGATCAATGCTCAAGATGATCAAGCTCATAGATGTGTCTACCAGGATGTGGATCCAGAAAACAAAGAAGGTATTTCGATATCAAAGGATGTTGTCCATGTGGCCGGAGATACATTGAAGAAGAACATAGCTTCACTAGGGCCATTAGTTTTGCCATTGAGAGAGCAATTCCTATATGTAATTTCTATTATATGCTGCAAGGTGTTGTATAGAAGAAGATCAAGCATCTATACTCCAAATTTCAATCTCGCCTTCGAGCATTTCTGCATACATTCCGGGGGAAGATCTGTCATAAATGCCATCGAGAGAAGCTTGAGGTTAAGGAAACAGGACGTGGAAGCATCCAACATGACCCTTTACAGATTTGGAAACACGTCGTCTTCTTCGATTTGGTATGAGCTTAGCTACACAGAAGCGAAAGGGAGGATGAAACGTGGCGATAGGGTGTGGCAAATCGCCATTGGAAGCGGATTCAAGTGTAGCAGCGCTGTGTGGAAATGTTTACAGGACGTGACCCCGGACAATGGCAGTGCTTGGAGGGATACAATTAACATGTACCCTGTACAAGTAACTGATATGAAAATAAGTTGA 1407 0.43 MQIFIFRTNEWAKLCSVIPRGDGVGELPATLLMISDGNRKRPRDSSLAILYFAYRRKAPIYLIDFTCYRPPSSHRLPIAMFEENSVLDDLDPESVAFQCKIIAKSGFSEETAITSSLAQIPKVKSLALALDEAETIMCSAISDLFWRNNINPKSIDILITNSCVFCPTPSLSAMVVNKFKMRSNIMSFNLSGMGCSAGIISVSLAKDLLRVHRGSLALIVSSETLNLNWYTGKVHSMLLTNCLFRMGGAAILMSSKVNDKHKAKYELQHIVRTINAQDDQAHRCVYQDVDPENKEGISISKDVVHVAGDTLKKNIASLGPLVLPLREQFLYVISIICCKVLYRRRSSIYTPNFNLAFEHFCIHSGGRSVINAIERSLRLRKQDVEASNMTLYRFGNTSSSSIWYELSYTEAKGRMKRGDRVWQIAIGSGFKCSSAVWKCLQDVTPDNGSAWRDTINMYPVQVTDMKIS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00984 468 CDD CHS_like 46 437 - -
Adu04g00984 468 Pfam FAE1/Type III polyketide synthase-like protein 54 339 IPR013601 GO:0006633|GO:0016020|GO:0016747
Adu04g00984 468 PANTHER 3-KETOACYL-COA SYNTHASE 21-RELATED 47 464 - -
Adu04g00984 468 SUPERFAMILY Thiolase-like 268 439 IPR016039 GO:0016746
Adu04g00984 468 PANTHER 3-KETOACYL-COA SYNTHASE 47 464 IPR012392 GO:0006633|GO:0016020|GO:0016747
Adu04g00984 468 SUPERFAMILY Thiolase-like 48 256 IPR016039 GO:0016746
Adu04g00984 468 PIRSF Very_long_ch_3-ktacl-CoA_syn 45 468 IPR012392 GO:0006633|GO:0016020|GO:0016747
Adu04g00984 468 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 358 438 IPR013747 -
Adu04g00984 468 Gene3D - 81 438 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00984 Adu-Chr4 16984805 16986848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00984 52 463 Miscellaneous Gene Families AT1G19440 53.269 4.21e-166 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00984 K15397 - gmx:100783404 686.797