Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00969 ATGGTTGCCGTCGAGAAAACCTCCAAGCCATACCCTACAACCGCAGAGGTAGTGGATGAGGTAAAGAGAATGGCAGACATAGGTTTCCCAATAGCAGCCATGAGCCTAGTGGGATACCTCAAGAACATGATCATGGTTGTATGCATGGGAAGGCTCGGGAGCCTCGAGTTAGCCGGTGGTGCTTTAGCCATCGGCTTCACAAACATCACCGGCTACTCCGTTCTCTCAGGCCTAGCCATGGGCATGGAGCCGCTTTGCACCCAAGCCTTCGGTTCTAGAAACTTCTCCTTAGTCTCCATCACAATGAAACGAACCATCCTAATGCTACTCCTAGCATCCCTACCCATTTCAATCTTGTGGCTAAAGCTTGAACCTTTGATGCTTTGCCTCCATCAAGATTCTGAAATAACACGAATTGCAAGCGTCTATTGCTTCTATTCTATCCCTGACCTCATTGCTAATAGCTTCCTTCACCCTATACGTATTTTTCTACGTAGCAAAGGTACAACTTGGCCTCTAATGTGGTCCACTTTCTTCTCCATTCTCATACATGTTCCAGTACTCGCTTTCTTCACCTTCAAACTCAACCTTGGTGTTCCCGGGATCGCGGTTTCGGCTTTTGTCGCAAATTTCAACACACTTTTGTTTCTTCTATCATACATGGTATACACAAATATCTCAAACAACAATAAAGATTCGTCGTCGTTGTCGCTTTTTTGTCCCTTGTCACAATCTCAAAAGGTTGTCCATGGTGATGCTATCTTCAATAATTCCTGTCCAACAACTTTGAGTCGCAAAGAATGGGGGATGTTGATAAGATTTTCGATACAAAGTTGTCTTGGCGTGTGTTTGGAATGGTGGTGGTACGAGCTAATGACGATTCTAGCGGGTTATCTTTATAACCCGCGTGTGGCTCTGGCAACCGCCGGCATAGTGATACAGACAACTTCGTTGATGTACACTCTGCCGATGGCGCTGAGCGCGTCCGTTTCCACTCGGGTTGGAAACGAACTGGGCGCGGGTCAACCCGAAAGGGCGAGCTTGTCCACGATGGTGGCCATAGGAATGGCACTAGCAAGCTCAGTGTTGGGATTATTATGGACCACTCTAGGGAGAGAGGAATGGGGTAGGGTTTTCACAAGTGATAGTGAAGTGTTGGAACTTACAATTACGGTTTTGCCCATAATTGGATTATGTGAGATTGCAAATTGTCCACAAACAACAAGCGTTGGAATCCTTAGAGGGAGTGCTAGGCCTGGGGTTGGAGCTGGAATCAACTTCTATTCTTTCTACTTGGTTGGGGCACCCGTGGCAATTGTTTTGGGGTTTATTTGGGAATTAGGGTTTGTGGGAATGTGTTATGGATTGCTATCGGCTCAGGTGGCTTGTGTTGTTTCCATCCTTCTTGTTGTGTATAACACCGATTGGGAAATGGAGGCGTTGAAAGCCAAAAGTTTGGTTGGAATTGGTTATGGTGGTTCGCTGTCACGTGACACAAATCATCATGGTTGTCGTCCACAACACCAAACAGTCAAATGTGAAGAATGTGTTGTCTTTATCCCTCACCACGGACAACATCAACAACAACCCAAACTCATTAATTGA 1605 0.4611 MVAVEKTSKPYPTTAEVVDEVKRMADIGFPIAAMSLVGYLKNMIMVVCMGRLGSLELAGGALAIGFTNITGYSVLSGLAMGMEPLCTQAFGSRNFSLVSITMKRTILMLLLASLPISILWLKLEPLMLCLHQDSEITRIASVYCFYSIPDLIANSFLHPIRIFLRSKGTTWPLMWSTFFSILIHVPVLAFFTFKLNLGVPGIAVSAFVANFNTLLFLLSYMVYTNISNNNKDSSSLSLFCPLSQSQKVVHGDAIFNNSCPTTLSRKEWGMLIRFSIQSCLGVCLEWWWYELMTILAGYLYNPRVALATAGIVIQTTSLMYTLPMALSASVSTRVGNELGAGQPERASLSTMVAIGMALASSVLGLLWTTLGREEWGRVFTSDSEVLELTITVLPIIGLCEIANCPQTTSVGILRGSARPGVGAGINFYSFYLVGAPVAIVLGFIWELGFVGMCYGLLSAQVACVVSILLVVYNTDWEMEALKAKSLVGIGYGGSLSRDTNHHGCRPQHQTVKCEECVVFIPHHGQHQQQPKLIN 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00969 534 PANTHER PROTEIN DETOXIFICATION 55 12 492 - -
Adu04g00969 534 CDD MATE_eukaryotic 20 482 IPR045069 GO:0042910|GO:1990961
Adu04g00969 534 PANTHER MULTIDRUG RESISTANCE PROTEIN 12 492 - -
Adu04g00969 534 Pfam MatE 279 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Adu04g00969 534 Pfam MatE 30 187 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00969 Adu-Chr4 16490946 16493637 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00969 K03327 - gmx:100785533 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00969 04 16490946 16493637 Adu04g00969 04 16490946 16493637 ECH
Adu01g02631 01 95588654 95590516 Adu04g00969 04 16490946 16493637 PCT