Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00890 ATGGCTTCTTCCCCTTCTTGTTCTAATTATTGTTACAACGGTAACAAGAGTTTGTTAGCATCGGTTATCGTGTCAGTTATCGTGGTAACAATAACGATAAGTAGTGGGGGCGTGGCAATTGCGGAAGGAGGGAGGGTGCCGTTTGCATGTGACCCGAAAAACGGTTTAACGAGGACGTTGAGATTCTGTTGGACGCACGTGCCAATCCACGTGAGGGTGCAGGACCTCATAGGGAGGCTCACATTGGCGGAGAAGATAAGGCTGGTGGTTAATAACGCCATAGCGGTTCCAAGGCTTGGGATTCAGGGCTATGAGTGGTGGTCGGAGGCCTTGCACGGTGTTTCTAATGTGGGCCCAGGGACTAAGTTCGGTGGGCCCTTCCCTGGTGCCACTAGCTTCCCTCAGGTCATCACAACCGCTGCTTCTTTCAACCAGTCTCTATGGCTTGAAATCGGACGGGTGGTGTCTGATGAAGCAAGGGCAATGTACAATGGTGGAGCTGCAGGGTTGACATTTTGGAGTCCCAATGTGAACATTTTTCGCGATCCTCGTTGGGGTCGTGGCCAGGAGACTCCTGGCGAAGACCCCACCTTGGCCGCGAAATATGCTGCAAGCTATGTGCAAGGACTCCAAGGCAACGGCGCGGGTGACCGGCTCAAGGTGGCTGCTTGTTGTAAACACTACACTGCCTATGATCTTGATAATTGGAACGGCATAGACAGATTTCATTTCAATGCCAAGGTTAGCAAGCAAGACTTGGCGGACACGTATGACGTACCATTCAAAGCTTGTGTGTTGGAAGGGAAGGTGGCTAGTGTCATGTGTTCCTACAATCAGGTCAATGGCAAGCCCACTTGTGCCGACCCCGAACTCCTTCGCAGCACCATCCGCGGCCAATGGGGTCTCAATGGGTACATTGTGTCGGATTGTGACTCGGTCGGAGTATACTATGATAGCCAACACTACACAAGGACGCCGGAAGAGGCGGCGGCGGATGCCATCAAAGCAGGCTTGGACTTGGACTGCGGCCCATTCTTGGCCATCCACACGGATGCGGCCATTAGACAAGGGCTCATTTCGGAGAACGATCTTAATCTTGCTTTGGCTAACCTTATTACGGTCCAAATGAGATTGGGCATGTTTGATGGTGAACCTTCGGCCCAACAGTATGGGAATTTGGGCCCAAGAGATGTGTGTACCCCGGCCCACCAGGAACTGGCCCTTGAGGCAGCTAGACAAGGCATCGTGTTGCTTGAAAACAAAGGGAACGCGTTGCCTTTATCCCCTACGCGGGTTCGCACCGTAGCTGTCATTGGGCCCAATTCAGATGTTACTGTTACAATGATAGGAAACTATGCTGGTGTTGCATGTGGCTACACATCACCATTACAAGGGATTTCAAGATATGTTAAGACCGTACATCAAGCAGGGTGCAGGGATGTTGCATGTGGAGGCAACCAACTATTTGGAGCCGCAGAGATCGCATCCAGGCGAACAGATGCAACAATACTTGTCATGGGCCTGGATCAGTCCATAGAGGCTGAGACTAGGGACAGGGTTGGGCTTCTCTTACCAGGCCTCCAACAGGAACTTGTGTCCAGAGTTGCCAGGGCCGCCAGGGGCCCAGTTGTCTTAGTTATCATGTCTGGTGGCCCGGTTGATGTCTCATTCGCCAAAAATGATCCCAAGATCACTGCAATTTTGTGGGCTGGTTATCCTGGCCAAGCTGGAGGAACTGCCATTGCTGATGTCATCTTTGGCAGAACCAATCCAGGTGGAAGGCTTCCAATGACATGGTACCCAGAAAGCTATCTATCGAAAGTGCCAATGACAATAATGGACATGCGTCCAAACCCATCAACAGGGTACCCAGGAAGAACCTACAGATTCTACAAGGGCCCAGTTGTGTACCCATTTGGGCATGGACTCAGCTATAGTAGATTCTCCCAAACCCTAGTACTTGCACCCAAACAAGTCTCAGTGTCCTTCTCAACTCCCCTCAAAGCCCAAACAAACTCAACTTGGGCTTCATCTTCAATCAAAGTGAGCCATGCAAATTGTGATGCCCTACATATGGGCTTCCATGTTGATGTGAAGAATGAAGGGTCAATGGATGGGACACATACCCTTTTGATTTTCTCTAAGCCACCAATTAAAGGGAATAATAATTGGTCAGAGGATAAGAAATTGGTGAGTTTTCATAAAGTGCTTGTTCCTGCTGGATCAAAGCAAAGGGTTAGTGTTGGTGTTCATGTTTGCAAGCATTTGTCTGTTGTTGATGAATTTGGGGTCCGAAGGATCCCAATGGGTGACCATGAATTACATATCGGTGATCTCAAGCATTCTATTTCGGTCCAAACTCAAGACTAA 2370 0.4979 MASSPSCSNYCYNGNKSLLASVIVSVIVVTITISSGGVAIAEGGRVPFACDPKNGLTRTLRFCWTHVPIHVRVQDLIGRLTLAEKIRLVVNNAIAVPRLGIQGYEWWSEALHGVSNVGPGTKFGGPFPGATSFPQVITTAASFNQSLWLEIGRVVSDEARAMYNGGAAGLTFWSPNVNIFRDPRWGRGQETPGEDPTLAAKYAASYVQGLQGNGAGDRLKVAACCKHYTAYDLDNWNGIDRFHFNAKVSKQDLADTYDVPFKACVLEGKVASVMCSYNQVNGKPTCADPELLRSTIRGQWGLNGYIVSDCDSVGVYYDSQHYTRTPEEAAADAIKAGLDLDCGPFLAIHTDAAIRQGLISENDLNLALANLITVQMRLGMFDGEPSAQQYGNLGPRDVCTPAHQELALEAARQGIVLLENKGNALPLSPTRVRTVAVIGPNSDVTVTMIGNYAGVACGYTSPLQGISRYVKTVHQAGCRDVACGGNQLFGAAEIASRRTDATILVMGLDQSIEAETRDRVGLLLPGLQQELVSRVARAARGPVVLVIMSGGPVDVSFAKNDPKITAILWAGYPGQAGGTAIADVIFGRTNPGGRLPMTWYPESYLSKVPMTIMDMRPNPSTGYPGRTYRFYKGPVVYPFGHGLSYSRFSQTLVLAPKQVSVSFSTPLKAQTNSTWASSSIKVSHANCDALHMGFHVDVKNEGSMDGTHTLLIFSKPPIKGNNNWSEDKKLVSFHKVLVPAGSKQRVSVGVHVCKHLSVVDEFGVRRIPMGDHELHIGDLKHSISVQTQD 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00890 789 Pfam Glycosyl hydrolase family 3 C-terminal domain 415 645 IPR002772 GO:0004553|GO:0005975
Adu04g00890 789 Gene3D Immunoglobulins 670 789 IPR013783 -
Adu04g00890 789 Gene3D - 72 390 IPR036962 GO:0004553|GO:0005975
Adu04g00890 789 PANTHER SUGAR HYDROLASE-RELATED 26 788 IPR044993 GO:0009044|GO:0045493
Adu04g00890 789 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 415 648 IPR036881 GO:0004553|GO:0005975
Adu04g00890 789 Pfam Fibronectin type III-like domain 727 778 IPR026891 -
Adu04g00890 789 Gene3D - 401 646 IPR036881 GO:0004553|GO:0005975
Adu04g00890 789 PANTHER BETA-D-XYLOSIDASE 1 26 788 - -
Adu04g00890 789 SUPERFAMILY (Trans)glycosidases 61 414 IPR017853 -
Adu04g00890 789 SMART Fn3_like_2 708 780 IPR026891 -
Adu04g00890 789 Pfam Glycosyl hydrolase family 3 N terminal domain 129 344 IPR001764 GO:0004553|GO:0005975
Adu04g00890 789 PRINTS Glycosyl hydrolase family 3 signature 133 152 IPR001764 GO:0004553|GO:0005975
Adu04g00890 789 PRINTS Glycosyl hydrolase family 3 signature 221 237 IPR001764 GO:0004553|GO:0005975
Adu04g00890 789 PRINTS Glycosyl hydrolase family 3 signature 295 313 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00890 Adu-Chr4 13951250 13959892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00890 11 788 Glycoside Hydrolase AT5G49360 72.692 0.0 1154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00890 - - aip:107639006 1560.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00890 04 13951250 13959892 Adu04g00890 04 13951250 13959892 ECH