Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00878 ATGAAGAAGATGAACAATAACAAGAATCCAACAATATCATGGGTTTTGATGTTGTTGTTTGTTGTTTGTGTGGTTAATGCACAATCATCGGTGAAGCCGGTGGTGAAGATAGTGAAGGGGAAAAAGCTTTGTGACAAAGGGTGGGAGTGTAAGGGTTTCTCTGCTTATTGTTGTAATGAGACAATCTCTGATTTCTTCCAAACTTACCAGTTTGAGAACCTCTTTGCAAAGAGGAATTCCCCGGTGGCTCATGCCGTCGGATTCTGGGATTACCAGTCGTTCATCACGGCCGCCGCGCTCTACCAGCCTCTTGGGTTCGGGACCACCGGTGGAAAGCTTGGTGGCATGAAAGAGGTTGCTGCTTTTCTTGGTCATGTGGGAAGCAAGACTTCTTGTGGATATGGGGTGGCAACAGGGGGACCCTTAGCATGGGGATTATGTTACAACAAGGAACTGAGTCCAGATAAATACTACTGTGATGACTACTACAAGTTGACCTATCCATGCACCCCTGGCGCCGCTTATTATGGCCGTGGCGCCATCCCTATTTACTGGAACTACAACTATGGAAAAATAGGAGAAGCCCTAAAGGTGAACCTATTGGACCACCCAGAATACATAGAGCAAAATGCCACGCTGGCATTCCAAGCAGCAATACACACGTGGATGACCCCACCAGACAAGCACATTCCTTCACCACACGATGCCTTTCATGCCAACTGGAAGCCAACTAAGAATGACACGTTGGCAAAGCGGGTCCCAGGTTTTGGTGCCACAATCAATGTTCTCTACGGTGACCAAGTTTGTGGCCAGGGTTCTGATGGTGATGACATGAACAACGTTATTTCTCATTACCTCTATTATCTTGATCTCATGGGTGTTGGCCGAGAAGAAGCTGGGCCCCATGATGTCCTCTCTTGTGCTGAGCAAAAGCCCTTTAAGCCCGCTGGGCCTCCATCTTCTTCAACAACTTGA 975 0.4769 MKKMNNNKNPTISWVLMLLFVVCVVNAQSSVKPVVKIVKGKKLCDKGWECKGFSAYCCNETISDFFQTYQFENLFAKRNSPVAHAVGFWDYQSFITAAALYQPLGFGTTGGKLGGMKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKELSPDKYYCDDYYKLTYPCTPGAAYYGRGAIPIYWNYNYGKIGEALKVNLLDHPEYIEQNATLAFQAAIHTWMTPPDKHIPSPHDAFHANWKPTKNDTLAKRVPGFGATINVLYGDQVCGQGSDGDDMNNVISHYLYYLDLMGVGREEAGPHDVLSCAEQKPFKPAGPPSSSTT 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00878 324 PANTHER CHITINASE-RELATED 15 317 - -
Adu04g00878 324 CDD chitinase_GH19 70 307 - -
Adu04g00878 324 Pfam Chitinase class I 70 297 IPR000726 GO:0004568|GO:0006032|GO:0016998
Adu04g00878 324 Gene3D Endochitinase, domain 2 150 209 - -
Adu04g00878 324 PANTHER CHITINASE-LIKE PROTEIN 1 15 317 - -
Adu04g00878 324 SUPERFAMILY Lysozyme-like 62 313 IPR023346 -
Adu04g00878 324 PIRSF Endochitinase 3 314 IPR016283 GO:0004568|GO:0005975
Adu04g00878 324 Gene3D - 70 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00878 Adu-Chr4 13770902 13773170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00878 27 313 Glycoside Hydrolase AT3G16920 81.533 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00878 - - gmx:100809617 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00878 04 13770902 13773170 Adu04g00878 04 13770902 13773170 ECH