Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00860 ATGGCTTCTCTGTTACTCCTGTTGGCATTATTCGCAGTAAATCTTCGCATTACTGGCGCTCAAATTGGTGTATGTTACGGGATGATGGGCAACAACCTACCATCAGCACAAGAAGTGATAGAGCTTTGCAAAGCAAACAACATTGTGAGAATGAGGCTCTACGATCCAAACCAAGCAGCTCTTGAAGCACTTAGAAACAGCGGCATTGAGCTCATGTTGGACGTTCCAAATTCCGACCTTCAAAGCCTCGCCAACCCAAACAACGCTGGCCAATGGGTTCAAACAAACGTCCTCAACTTCTATCCAGCTGTCAACATCAAATACATCGCCGTCGGCAACGAAGTCAAACCCGTCGGCGACTCCACTTCATGGATGGCTCAGTACGTTCTCCCAGCAATCCAAAACGTGTATCAAGCCATAAGAGCTAAAGGCCTTCAAGATCAAATCAAGGTTTCAACCGCCATCGACATGACCCTTATAGGAACCTCTTATCCCCCATCAAAGGGTTCATTTCGAAGCGATGTAAGGTCCTACTTGGACCCCATAATCGGCTACTTAGTCTATGCAAATTCGCCACTTTTCGCAAATGTGTACCCTTATTTTAGCTACGTTGGAGACCCCAATGATATATCACTGCCTTACGCTTTGTTTACTGCACCGAATGTTGTTGTCTGGGATGGATCAAGAGGGTACCAAAACCTGTTTGATGCAGTTTTGGACTCCGTCCATGCAGCTCTTGATAACACCGGGATTGGATACGTGAAAGTGGTTGTGTCTGAGAGTGGATGGCCTTCGGATGGTGGATTTGCGGCAACATATGACAATGCAAGAGTTTATTTGGGAAATTTGATTCAACATGTGAAGGGTGGTACCCCAATGAGGCCTAATGTGGCTATAGAGACTTACCTGTTTGGGATGTTTGATGAGAACCAAAAGAGCCCTGAAGTGGAGAAACATTTCGGTGTCTTCTATCCAAACAAGCAAAAGAAGTATCCATTTAATTTTGGATTTAGTGCAGCAAGACACTGGGAGGATGACATTGTTACTATTAAGAATGCTTCTGTTCCTTTAAGGAGCGACGCCTAA 1086 0.4512 MASLLLLLALFAVNLRITGAQIGVCYGMMGNNLPSAQEVIELCKANNIVRMRLYDPNQAALEALRNSGIELMLDVPNSDLQSLANPNNAGQWVQTNVLNFYPAVNIKYIAVGNEVKPVGDSTSWMAQYVLPAIQNVYQAIRAKGLQDQIKVSTAIDMTLIGTSYPPSKGSFRSDVRSYLDPIIGYLVYANSPLFANVYPYFSYVGDPNDISLPYALFTAPNVVVWDGSRGYQNLFDAVLDSVHAALDNTGIGYVKVVVSESGWPSDGGFAATYDNARVYLGNLIQHVKGGTPMRPNVAIETYLFGMFDENQKSPEVEKHFGVFYPNKQKKYPFNFGFSAARHWEDDIVTIKNASVPLRSDA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00860 361 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 14 342 - -
Adu04g00860 361 SUPERFAMILY (Trans)glycosidases 22 335 IPR017853 -
Adu04g00860 361 ProSitePatterns Glycosyl hydrolases family 17 signature. 254 267 IPR000490 GO:0004553|GO:0005975
Adu04g00860 361 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 342 IPR044965 GO:0004553|GO:0005975
Adu04g00860 361 Pfam Glycosyl hydrolases family 17 22 335 IPR000490 GO:0004553|GO:0005975
Adu04g00860 361 Gene3D Glycosidases 21 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00860 Adu-Chr4 13347113 13349640 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00860 28 341 Glycoside Hydrolase AT4G16260 64.873 3.38e-147 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00860 - - ccaj:109791097 530.791