Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00850 ATGGCGGAGAAGTACAACATGAAGAACCCCGCCGTCAAGCGCATTCTCCAAGAGGTCAAGGAGATGCAGTCCAATCCTTCCGATGATTTCACGAGTCTCCCTCTCGAGGAAAATATATTTGAATGGCAATTTGCAATTAGAGGACCTCGTGATACTGAATTTGAGGGTGCTGTCTATCATGGACGGATCCAATTGCCTTCAGAGTATCCATTCAAACCACCTTCATTTATGTTATTGACGCCTAATGGACGTTTCGAGACCCAAACAAAGATTTGCTTGAGCATATCAAATCATCACCCTGAGCATTGGCAACCATCATGGAGTGTAAGGACCGCTTTAGTTGCACTGATTGCATTCATGCCTACCAACCCTAATGGTGCTTTGGGGTCGTTGGACTACAAGAAGGAAGAAAGGCGTACCTTGGCCATCAAATCTCGTGAAGCGCCTCCGAAATTTGGGACTCCTGAACGTCAAAAACTGATTGATGAGATACACGAGTATATGCTAAGCAAGGCACCCCCTGTTCCTCAACATAGCTCCATACAACTACTCGAAGAAGAGCATTCCAGAGACGAGGAGGCCGAGTCCCAGGCAAATTCCCATAATGCTGAGGCTTTACCTGCTGAAGAGGGGATTCCAGATCAAGCAGGAGATAGAATTGTTGAAGAGGAGGTAGTTGTTGATGATAATCTTCAAGGAGTTGAAGCTTCAACGGAGATCCAATCCAATGTTTCAAGGAACCAGTCGCCCCATAATTCTGGTTTAAGGGTTCAAAATCCGAAGCCGGAGACTAGGATACAGCAAAAGCTTGATGATCATATTTTCACATTGATAGCCATTGGACTTGCCATTGCAATTGTGGCCCTTTTGCTGAAGAATCAATCTAACGCCACCTTCCCTCGCTATTATCATCACCAGGCTCACGCGCCCGAGACAAGTCAGCAACCACACCACCCATTTGGCGCTCACATTTTCCATGATGACACCCCTGGAGCTGAAGCAACCCACCACTACCAGCTGGGTGTTGATGCTCCGGCACAATCGCCGTCGAGCCATGGCGGCGGTGGCCTTGACTCATCATCATTCTACTCTTCTTTCTCGGATCTCCTTAAAGGAACCTTACGCGGCCACACGTTAACAATGCCCGACGATATCACACACTTGTCAACCAAACACCACAACGAACTCAGACAAATATGCGGCCACACCGATTACCCTGACGTGTGCTTCTCCACCATCGCACCGCATCTCCACGGCGAGCACTTCGACCTCACCCACGTCCTCCAAGCTTCCATAACGGCCTGCTCGATCGAGTTGAAGCTGACCATAGAGAAGTCGAAGAGGCACTCGAGCACTTCGTCGCCGGAGAACCTAGGTGCAGTCATGTACGTGGACTGTAGGGTGCAGTATACCAACGCGCTTGAGAACCTCCAAAAAGCGAGTGATGCTGCTGCGGGGCGTGATCTTGGAACGGTTACCATCATGCTTAGTTCTGTTATGGCTGACGTGGCAACATGTGAGAGCGGTTTTCAGGATCTTGAGTCCTCTACCTTCGTTTCCGGGTCGGTTGGAATTATGGCAAGCAATTGTCTTGCCATTGCTCATATGGTTCCCCATCAGTAG 1623 0.4911 MAEKYNMKNPAVKRILQEVKEMQSNPSDDFTSLPLEENIFEWQFAIRGPRDTEFEGAVYHGRIQLPSEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRTLAIKSREAPPKFGTPERQKLIDEIHEYMLSKAPPVPQHSSIQLLEEEHSRDEEAESQANSHNAEALPAEEGIPDQAGDRIVEEEVVVDDNLQGVEASTEIQSNVSRNQSPHNSGLRVQNPKPETRIQQKLDDHIFTLIAIGLAIAIVALLLKNQSNATFPRYYHHQAHAPETSQQPHHPFGAHIFHDDTPGAEATHHYQLGVDAPAQSPSSHGGGGLDSSSFYSSFSDLLKGTLRGHTLTMPDDITHLSTKHHNELRQICGHTDYPDVCFSTIAPHLHGEHFDLTHVLQASITACSIELKLTIEKSKRHSSTSSPENLGAVMYVDCRVQYTNALENLQKASDAAAGRDLGTVTIMLSSVMADVATCESGFQDLESSTFVSGSVGIMASNCLAIAHMVPHQ 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00850 540 Gene3D Invertase/pectin methylesterase inhibitor family protein 394 538 IPR035513 -
Adu04g00850 540 MobiDBLite consensus disorder prediction 308 328 - -
Adu04g00850 540 PANTHER BNAC01G21910D PROTEIN 6 295 - -
Adu04g00850 540 CDD UBCc 12 151 IPR000608 -
Adu04g00850 540 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 394 537 IPR035513 -
Adu04g00850 540 SMART PMEI_2 391 533 IPR006501 GO:0004857
Adu04g00850 540 SMART ubc_7 13 173 - -
Adu04g00850 540 Gene3D Ubiquitin Conjugating Enzyme 1 173 IPR016135 -
Adu04g00850 540 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 165 IPR000608 -
Adu04g00850 540 MobiDBLite consensus disorder prediction 239 260 - -
Adu04g00850 540 Pfam Plant invertase/pectin methylesterase inhibitor 396 533 IPR006501 GO:0004857
Adu04g00850 540 MobiDBLite consensus disorder prediction 184 198 - -
Adu04g00850 540 MobiDBLite consensus disorder prediction 184 210 - -
Adu04g00850 540 CDD PMEI-like_2 394 537 - -
Adu04g00850 540 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 6 295 - -
Adu04g00850 540 Pfam Ubiquitin-conjugating enzyme 14 125 IPR000608 -
Adu04g00850 540 SUPERFAMILY UBC-like 11 133 IPR016135 -
Adu04g00850 540 TIGRFAM PME_inhib: pectinesterase inhibitor domain 386 536 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00850 Adu-Chr4 13192827 13196861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00850 3 293 Miscellaneous Gene Families AT3G17000 61.486 4.98e-121 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00850 K10578 - adu:107483429 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00850 04 13192827 13196861 Adu04g00850 04 13192827 13196861 ECH