Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00818 ATGGAATTTGAAGCACACGCCCCTTCTTCTCCTCCTCCTTCTTATTCTTATTCATTAAGCGGCGTCGTTTTGGACCCTCCTATTCATCCTCGACCCCCGACGCCGCCGCCGCCACCTCCACCGCCGTTTCTGCGTATTGATCCTTCTTCGGGGGTGCTTGTTCCACCCCCGCAACCTTTCCCTTTCAACCTTTCTCTCATCTTCTCAATGGATCACCAGAGGTCTATGTCCCTTCTTCAGTTTATGGCTGATGAAGGACTTGTTCCTTCTGTGGAAGAGGAAGAGAGAAGGAAGAATGCTATTCAGAAGCTCAAACAGATTGTGTCAACATGGATCAAGCAGGTTGCTGTACAACGGCGATTACCAAAGCATCAGATTGCAGCTACATCTGCCACGGTATTGACATATGGATCTTATGGCCTTGGAGTTCACAGTGCTGACTCCGACATTGATGCTTTGTGTGTTGCTCCTTATTTTGCAACCCTTTCGGAAGACTTCTTTGTTGTTTTGCACGACATGCTTAAAAGTAGGCCAGAAGTGTCGGAGCTTTACTGTGTCAAGAGTGCAAAAGTCCCTCTTATGCGATTCAAATTCGATGGAATTTCCATTGATCTTCCATATGCTTGCTTGAAAGTACTATACGTTCCTGAGAGTGTTGACATACTACACCCATTCTTCTTGAGGAATATTGATGACACCAGCTGGAAAAGCTTGTCTGGTGTACGAGCAAATAAACGCATTCTTCAGCTAGTACCAAATGTTGAGAATTTTCAAGCTATGGTACGGTGTCTTAAATTATGGGCAAAAAGGCGAGGAGTTTATGGCACATTACATGGTTACTTGGGAGGAGTCCATTTGGCAATTCTCGCAGCTTATGTTTGTCAACGGCATCCTGATGCCTCCATAAATGCTTTAATTATGAACTTTTTCCGAACATTTGCCTTTTGGTCCTGGCCTTCGCCAGTGACGCTGCAGGAAGGAATGTTCCTAAAACAACTAGAGAGCATGGAAATGCGATCTTTCATGCCTATTTTGCTGCCATCTAGCCCTTATGAATTTTGCCATTCAAATATAACCAAAAGCACTTTCTACCGGATCAGGACCGAGTTTGTACGTGGATACAATATGACAAGGGATCTTTTGAAGCCAGGTTTCACGTGGGACAATATATTTGAGCTTTTTCCATACTCAAGAAGGTATTCCAAATTTGTCAAGATTTACCTATCTACTACCAATCAATGTGAGCTTGGCGACTGGGTTGGTTGGGTCAAGTCACGCTTCCGCAGTCTTCTCATCATTCTTGAGGGGATCCAGGGTTTTTGTGATCCTAACCCTACAGAGTACACTGACCCCGACAAAAGCGAGCCAAACATGGTTTTCTACTGGGGCTTGCAATCTGGAAGGAACAACTACCTGGACATAGAGTTGGTGGAGGGAGAGTTCATGAAGGTTATCAGAAACGGCTGCGAGGGAACTCCCGGTAGGTTGGAGTTGCACCTCCTATCGCCGTCGCAGCTCCCCAAGAATGCCCAGTTTGATGATAGAAGTATAATTATTAATAACAAAGGTAGAAAAGCATGCTGGAAAATGGTTGGTTGTGACAAGAAAAGGAGCCAAGTTTATCCACAGCATCATATTCAACATTGCCTTGTTGGTCATGTCTCATCTAATGGGGAGGGTGAATGCTTAAGTTCTAGTGGCTAG 1704 0.4489 MEFEAHAPSSPPPSYSYSLSGVVLDPPIHPRPPTPPPPPPPPFLRIDPSSGVLVPPPQPFPFNLSLIFSMDHQRSMSLLQFMADEGLVPSVEEEERRKNAIQKLKQIVSTWIKQVAVQRRLPKHQIAATSATVLTYGSYGLGVHSADSDIDALCVAPYFATLSEDFFVVLHDMLKSRPEVSELYCVKSAKVPLMRFKFDGISIDLPYACLKVLYVPESVDILHPFFLRNIDDTSWKSLSGVRANKRILQLVPNVENFQAMVRCLKLWAKRRGVYGTLHGYLGGVHLAILAAYVCQRHPDASINALIMNFFRTFAFWSWPSPVTLQEGMFLKQLESMEMRSFMPILLPSSPYEFCHSNITKSTFYRIRTEFVRGYNMTRDLLKPGFTWDNIFELFPYSRRYSKFVKIYLSTTNQCELGDWVGWVKSRFRSLLIILEGIQGFCDPNPTEYTDPDKSEPNMVFYWGLQSGRNNYLDIELVEGEFMKVIRNGCEGTPGRLELHLLSPSQLPKNAQFDDRSIIINNKGRKACWKMVGCDKKRSQVYPQHHIQHCLVGHVSSNGEGECLSSSG 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00818 567 Pfam Poly(A) polymerase central domain 69 392 IPR007012 GO:0004652|GO:0043631
Adu04g00818 567 SUPERFAMILY PAP/OAS1 substrate-binding domain 252 392 - -
Adu04g00818 567 PANTHER POLY A POLYMERASE 62 558 - -
Adu04g00818 567 Gene3D Poly(A) polymerase predicted RNA binding domain 396 493 - -
Adu04g00818 567 CDD NT_PAP_TUTase 96 210 - -
Adu04g00818 567 Gene3D - 69 391 - -
Adu04g00818 567 PANTHER NUCLEAR POLY(A) POLYMERASE 3 62 558 - -
Adu04g00818 567 MobiDBLite consensus disorder prediction 1 50 - -
Adu04g00818 567 Gene3D Beta Polymerase, domain 2 89 245 IPR043519 -
Adu04g00818 567 SUPERFAMILY Nucleotidyltransferase 58 248 IPR043519 -
Adu04g00818 567 MobiDBLite consensus disorder prediction 26 50 - -
Adu04g00818 567 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 395 488 IPR011068 GO:0003723|GO:0016779|GO:0031123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00818 Adu-Chr4 11956614 11960361 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00818 K14376 - qsu:112002927 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00818 04 11956614 11960361 Adu04g00818 04 11956614 11960361 ECH