Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00555 ATGAGCTTCAGAGTAAGAGAATCACAAAAGGAATTGGGGTCTCCAAGGGGAGAGATTGGAGAGATAGATACAAGGGCTCCATTCCAATCTGTGAAAGCTGCTGTTACTTTATTTGGTGAGGTAGCAGTTCCAAAATCTTCTTCTATCAAGAGGAAATCCTCTGAGAATGTACTGGAAAAGGAGACACAACTTCTGTTGGCTCAAAGAGAACTAAACATGATAAAGAAACAGCTTGGCAGTGCTGAGAATACAAAATCTAAAGCACTTGCTGAGCTTGAGAGGGCCAATGTGACACTGCAGGACTTGACAAAGAAGCTCATCAGTGTCAGAGAATCTAAGGAGACGGCAATAGAGGCAGCCGAAGTCGTGAAGAACAAGGCCAAAATACTCGAGGAACAACTGTCCCAGAAAGCTATAGGATATGAAGCTTGGAAAAGAGAACTAGAGCAAGCAAGAAAGGAGTATCAAACAACTGTGAAGGAACTAGATGCTTCCAAGCAAGAACTCAACCAGATAAGGCAAGACTTCGATGCAGCTTTGGAGGCAAAGTTGGCTGCATTCCAAACTGCAGGGGAAGCTCAACGCTCCACGAAGATGAACTTGGAAAAAGTCAATGAAATGTCAAATGAAATCGCAAACATGAAGGCATCAATTGAACAGCTGAAGCTTCAAACTCTAAAAGCACAAGAAGAACAGGTACAGGTCATGCAGGAAAGGGAAAGCCAACTAAGCTATTACATAACCGCAAAGGAAGATGCGCAGGCAAAGTTGACGGCCTTAAAGGCCGAATATGACCCTGAACTAACAGCAAGCCTAGAGGTGAAACTGGCCGAAACAAGTGCAGAGATTCAGCTTCTTCAGGAGCAGATGAGGGAGGCACATGCTTCTGAAATGGAATCTGTGAGACAAATGACTGATGAGATTAAACAAGCTACAAAGATGCTGCATGAAGTTGTTGCAGAAGAAAATTCCCTGAGAGAATTAGTTGCTTCTCTTAGGACAGAATTAGAACAAGTGAAGAGAGACCAAGAAGAACTTAAGGAGAAGCAACAGGCGGCAGAAGCTCTTGCTGCCAGCCTCACCAGTGAACTACAAACTATCAAGGAAGAGGCAGGGCCTGACCCTGGTTCTGTGGAGGAAGTTGATCTCACTCAAGAGATGAGTTTGAAGATTCAGGAGCTAGCATTGGAGACAGAAAGTGCAAAAAGGGAAGAAGAAGAATTGAGAGTACAAACCGAAGAGCTGAAGCGAGAAGCTGAAAAAGCTCAGGCCATGGCTGAAGAATTAGGGAGAAAGCTGGAGGATGCCCTTAGAGAGGCTGAAGAATCAAAAGCAGCAGAACGGAAAGCGATTCAGGAAATGAAAACATTGTCTGATATGCGAGGGAGAGTCTCCGATGCAGATTCTAATTCTAATGCTAATGCTAATGCTAATAGCAAGATTGTATTATCAGTCAAGGAGTTTGCAGCTTTGAGTGGAAAGATCAAGGAATCCGAAGATTTGATTGAGAGGACAGAAGCAGCTGCACATGCTCAGGTGGAAGCAATCAATGCACGGAAAAGAGAAGTGGACAAGAAAGTAGAAGCTAACCTGAAAGCAATTGAAGAAATTAAGGCTGCAACAGATATGGCTCTTAGGAATGCAGAGATGGCAGATTCTGCGAAAGAAGCAGTCGAAGATGAGCTAAGAAGGTGGCGTGAAGAACAAAACAGCGATATGGACTATGCAGAAAATTCTGCAAGATCAATCTCCTTGCACATCTAG 1764 0.4382 MSFRVRESQKELGSPRGEIGEIDTRAPFQSVKAAVTLFGEVAVPKSSSIKRKSSENVLEKETQLLLAQRELNMIKKQLGSAENTKSKALAELERANVTLQDLTKKLISVRESKETAIEAAEVVKNKAKILEEQLSQKAIGYEAWKRELEQARKEYQTTVKELDASKQELNQIRQDFDAALEAKLAAFQTAGEAQRSTKMNLEKVNEMSNEIANMKASIEQLKLQTLKAQEEQVQVMQERESQLSYYITAKEDAQAKLTALKAEYDPELTASLEVKLAETSAEIQLLQEQMREAHASEMESVRQMTDEIKQATKMLHEVVAEENSLRELVASLRTELEQVKRDQEELKEKQQAAEALAASLTSELQTIKEEAGPDPGSVEEVDLTQEMSLKIQELALETESAKREEEELRVQTEELKREAEKAQAMAEELGRKLEDALREAEESKAAERKAIQEMKTLSDMRGRVSDADSNSNANANANSKIVLSVKEFAALSGKIKESEDLIERTEAAAHAQVEAINARKREVDKKVEANLKAIEEIKAATDMALRNAEMADSAKEAVEDELRRWREEQNSDMDYAENSARSISLHI 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00555 587 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 5 578 - -
Adu04g00555 587 Coils Coil 269 296 - -
Adu04g00555 587 Coils Coil 548 568 - -
Adu04g00555 587 PANTHER PREFOLDIN 5 578 - -
Adu04g00555 587 Coils Coil 64 133 - -
Adu04g00555 587 Coils Coil 301 370 - -
Adu04g00555 587 MobiDBLite consensus disorder prediction 453 474 - -
Adu04g00555 587 Coils Coil 141 182 - -
Adu04g00555 587 MobiDBLite consensus disorder prediction 1 23 - -
Adu04g00555 587 MobiDBLite consensus disorder prediction 1 18 - -
Adu04g00555 587 Pfam Weak chloroplast movement under blue light 21 570 IPR008545 -
Adu04g00555 587 Coils Coil 391 457 - -
Adu04g00555 587 SUPERFAMILY Tropomyosin 67 180 - -
Adu04g00555 587 Coils Coil 204 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00555 Adu-Chr4 6829801 6832898 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00555 - - gmx:100818297 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00555 04 6829801 6832898 Adu04g00555 04 6829801 6832898 ECH
Adu01g02883 01 99312959 99314903 Adu04g00555 04 6829801 6832898 PCT