Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00416 ATGGCCACGTCAGCAGCTGCCATGGACGGAGCCGCTGCGGCATCCTTGAGGTCGGTGGTGCAGCGCGTCCACCAGGCCGCCGAGCGATCAGCCCGGACGCCACAACAGGTCCGTATAGTCGCCGTCAGCAAGACCAAGCCCGTCTCCGTCATCCGCGAGGTCTACGATTCCGGCCACCGCTGCTTCGGCGAGAACTACGTTCAAGAACTCGTCGAGAAAGCTCCTCAGCTTCCAGAAGATATTGAGTGGCATTTCATCGGAAATTTGCAGAGCAATAAGGCGAAGCTTCTTGTCAATTCTGTTCCCAACCTTGAATATGTAGAAACTGTAGATGATGAGAAGATAGCAAATTGTCTTGATAATGCTGTAGCAAACTTAGGCAGGAAACCATTGAAGGTTTTCGTCCAAGTGAATACAAGCGGAGAAACATCTAAATTTGGTGTTGACCCTGCTGAGTGTGTGGACCTTGTGAAATATGTTAAGGACCGTCAATGCCTTGAGTTTTGTGGCCTAATGACAATTGGTATGCCGGATTATACATCTACCCCGGAAAATTTTAAGACGTTATGGAATTGTAGAAGTGAAGTTTGCAAAGCAATTGGAATACCAGAAGATCAATGTGAACTATCAATGGGCATGTCTGCAGACTTTGAGCAAGCTATTGAGATGGGAAGTACAAATGTGAGGATTGGATCTACTATATTTGGCGCCAGAGAGTACCCAAAGAAACAAAAGTAG 738 0.4743 MATSAAAMDGAAAASLRSVVQRVHQAAERSARTPQQVRIVAVSKTKPVSVIREVYDSGHRCFGENYVQELVEKAPQLPEDIEWHFIGNLQSNKAKLLVNSVPNLEYVETVDDEKIANCLDNAVANLGRKPLKVFVQVNTSGETSKFGVDPAECVDLVKYVKDRQCLEFCGLMTIGMPDYTSTPENFKTLWNCRSEVCKAIGIPEDQCELSMGMSADFEQAIEMGSTNVRIGSTIFGAREYPKKQK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00416 245 CDD PLPDE_III_YBL036c_euk 16 236 - -
Adu04g00416 245 PIRSF YBL036c_PLPDEIII 2 244 IPR011078 GO:0030170
Adu04g00416 245 Gene3D Alanine racemase 2 245 IPR029066 -
Adu04g00416 245 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 5 243 IPR011078 GO:0030170
Adu04g00416 245 ProSitePatterns Uncharacterized protein family UPF0001 signature. 83 97 IPR011078 GO:0030170
Adu04g00416 245 SUPERFAMILY PLP-binding barrel 12 236 IPR029066 -
Adu04g00416 245 Hamap Pyridoxal phosphate homeostasis protein. 14 237 IPR011078 GO:0030170
Adu04g00416 245 TIGRFAM TIGR00044: pyridoxal phosphate enzyme, YggS family 17 238 IPR011078 GO:0030170
Adu04g00416 245 Pfam Alanine racemase, N-terminal domain 27 238 IPR001608 -
Adu04g00416 245 PANTHER PYRIDOXAL PHOSPHATE HOMEOSTASIS PROTEIN 5 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00416 Adu-Chr4 4901795 4904310 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00416 K06997 - qsu:112004008 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00416 04 4901795 4904310 Adu04g00416 04 4901795 4904310 ECH