Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu04g00079 ATGGAATCAAGAGCCACCATTGTTGCAGTTTGTTGCATCTTAATTGTGCCTTCCACCCTCTTCACTACTCTCGGCGATGCTAGAATTCATGGAAAAGCTTCAAAAGACAAGGTAGAATCTGTAGAGCGTTTTAACAAGTACTCATCACTGGGATATTCAGATTTTAATTCATATGGGTCTCCTTCTTCATTACCACTACCACCTTTCAATTCGGTAATAACACCACAGCTGGCACCAGAAACTTCCACCCCACTCTCTCCATTCACACCTTCACTACCACCACCACCAAAGCGTGCTCCAAAGCCGCCACCACCGCCGTCATCATCGAATTCTGCGCACCATAAAAAGGCAGTTTGGTGTGTAGCAAAGCCCACAGTGCCTGATCCGATAATAAAGGCGGCGATGGACTATGCTTGTGGGTCTGGGGCGGAGTGCAAGAGCATTCAGCCCAATGGGCCTTGCTACATTCCTAACACCATGCTGGCTCATGCTTCTTATGCTTTCAATAGTTACTGGCAGAACACAAAGGTTGGTGGAGGCACTTGTGACTTTGGTGGCACTGCAATGCTTGTAACAGTTGATCCAAGCTTTGGTAAATGCCAGTTCGTGTTGACTTAG 618 0.4709 MESRATIVAVCCILIVPSTLFTTLGDARIHGKASKDKVESVERFNKYSSLGYSDFNSYGSPSSLPLPPFNSVITPQLAPETSTPLSPFTPSLPPPPKRAPKPPPPPSSSNSAHHKKAVWCVAKPTVPDPIIKAAMDYACGSGAECKSIQPNGPCYIPNTMLAHASYAFNSYWQNTKVGGGTCDFGGTAMLVTVDPSFGKCQFVLT 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu04g00079 205 PANTHER EXTENSIN-LIKE 81 204 - -
Adu04g00079 205 PANTHER BETA-1,3 GLUCANASE 81 204 IPR044788 -
Adu04g00079 205 Pfam X8 domain 119 189 IPR012946 -
Adu04g00079 205 SMART X8_cls 118 202 IPR012946 -
Adu04g00079 205 Gene3D - 112 204 - -
Adu04g00079 205 MobiDBLite consensus disorder prediction 86 109 - -
Adu04g00079 205 MobiDBLite consensus disorder prediction 79 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu04g00079 Adu-Chr4 856667 858364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu04g00079 114 202 Glycoside Hydrolase AT4G26830 50.000 3.54e-25 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu04g00079 - - ahf:112740866 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g00079 04 856667 858364 Adu04g00079 04 856667 858364 ECH
Adu04g00079 04 856667 858364 Adu07g00630 07 6788221 6790891 PCT