Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04548 ATGGATCCAGATGCGTTGGCGAAGGCGTTCGTTGAGCACTACTACACCACCTTCGACAACAACCGCCCCGGGCTGGCCAGCCTCTACCAGGACGGCTCCATGCTCACCTTCGAGGGCCAGAAGATCCAGGGCTCCCCGAACATCGTCGCCAAGCTCACCTCTCTCCCTTTCAGCCAGTGCCACCACTCCATCACCACCGTTGATTGCCAGCCCTCCGCCGCCACCAACGGCATGCTCGTCTTCGTCAGCGGCAACCTCCAGCTCGCCGGCGAGCAACACGCCCTCAAGTTCAGCCAGATGTTCCATTTGTTACCAACACCGCAGGGAAGCTATTATGTTTTGAATGATATATTTCGTTTGAACTATGCTTGA 372 0.5699 MDPDALAKAFVEHYYTTFDNNRPGLASLYQDGSMLTFEGQKIQGSPNIVAKLTSLPFSQCHHSITTVDCQPSAATNGMLVFVSGNLQLAGEQHALKFSQMFHLLPTPQGSYYVLNDIFRLNYA 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04548 123 Pfam Nuclear transport factor 2 (NTF2) domain 7 120 IPR002075 -
Adu03g04548 123 Gene3D - 1 123 - -
Adu03g04548 123 ProSiteProfiles Nuclear transport factor 2 domain profile. 6 120 IPR018222 -
Adu03g04548 123 PANTHER BNAA07G08920D PROTEIN 1 123 - -
Adu03g04548 123 CDD NTF2 2 122 IPR018222 -
Adu03g04548 123 PANTHER NUCLEAR TRANSPORT FACTOR 2 1 123 IPR045875 GO:0006913
Adu03g04548 123 SUPERFAMILY NTF2-like 3 121 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04548 Adu-Chr3 134834813 134836886 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04548 - - pvy:116131274 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04548 03 134834813 134836886 Adu03g04548 03 134834813 134836886 ECH