Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04542 ATGACAAGAAGTGGAAGCCGGTTGTACTTATTAGTGTTGTTGGTATTGGTGGCGCTGCAAGTGGAAGTGGAAGGAGCGAATGCTTTGGCGGGGAAGTGCAGTACGGTGGTGCAGCAGGTGATACCGTGCCTGAACTTCGCGACGGGGCAGGCTCAGGTACCGTCGAAGGAGTGCTGTGACGCTTCGTCGAAGATCAAGGACACCGCACCGGAGTGCCTCTGCTACGTGATCCAGCAAACCCACAAGGGCAGCCCTGAGGTGAAGAGTATGGGTATTCAAGAGGCTAGGCTCATCCAGCTCCCTTCTGCTTGCAAATTGAAGAATGCTAGCATCTCCAACTGTCCCAAGCTTCTAGGTCTATCTCCAGGCTCAGCAGATGCACAAATCTTCACTAACATCTCTTCATCGAGTAATAGTAGTACGGCTTCATCCTCAACCTCGTCCTCATCCTCATCAGCAACACCCACCTCGCAGAACGATTCCCATGGAACCATGCTTAGACCTCCTCTCATGAGAGACATAACAGCGCTCATGGCCTTGCCCATGCTTCTCCTTGTGCTTCCCACTGCAACTGTCACTCTTTACTCGTAA 591 0.5228 MTRSGSRLYLLVLLVLVALQVEVEGANALAGKCSTVVQQVIPCLNFATGQAQVPSKECCDASSKIKDTAPECLCYVIQQTHKGSPEVKSMGIQEARLIQLPSACKLKNASISNCPKLLGLSPGSADAQIFTNISSSSNSSTASSSTSSSSSSATPTSQNDSHGTMLRPPLMRDITALMALPMLLLVLPTATVTLYS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04542 196 MobiDBLite consensus disorder prediction 135 164 - -
Adu03g04542 196 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 9 179 - -
Adu03g04542 196 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 9 179 IPR043325 -
Adu03g04542 196 Pfam Probable lipid transfer 14 114 IPR016140 -
Adu03g04542 196 MobiDBLite consensus disorder prediction 135 167 - -
Adu03g04542 196 CDD AAI_LTSS 42 106 - -
Adu03g04542 196 Gene3D - 30 111 IPR036312 -
Adu03g04542 196 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 32 114 IPR036312 -
Adu03g04542 196 SMART aai_6 33 114 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04542 Adu-Chr3 134787218 134788296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04542 32 187 Acyl Lipid Metabolism Gene Families AT1G27950 44.872 1.95e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04542 - - ahf:112734859 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04542 03 134787218 134788296 Adu03g04542 03 134787218 134788296 ECH