Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04528 ATGCCTGGATGCATTGCTGGTAAGAAGTGGTTCACAGAACCGAATATGTGTTTTTCTAATTTACCCAATAAGGAAAATCAAACACTTTCTAAGAGCAAGCATTCTGTGCGCTCTGAGTTATCGGATAAGGATGATGATAGCTCGATTCTACCTCGGCTGCCTGATGATGTTTCCAAGTATTGCTTAGCACTTGTGCCTCATTCGGACCTCCCGGCTATGGCCGGTGTTTGTAAGAGATGGAGGTGTTTCATTCAGAGCAAAGAATTCATAATGGTAAGAAAATTGGCTGGCTTGGTTGAGGAATGGCTTTTCCTGTTAACTGCAGATAAAGAAGGGAAAGGAAGCCATTGGGAGGTAATGGATTGTGAGGGTCAGAATCGTCGATCTCTTCCACCAATGCCTGGTCCAACAAAGGCTGGATTTGGGGTGGTGGTTGTTAATGGGAAGCTACTTGTCATGGCTGGCTATTCAGTTATTGATGGAACTGCCACTGCCTCAGCAGAGGTTTACCAATACAATTCTTGTGTCAACAGTTGGAGCAGGTTATCAAACATGAATGTGGCTCGATATGACTTTGCTTGCGCTGAGGTCAATGGCTTGGTGTACGCTGTTGGAGGCAACGGAGTAGATGGCGACAGCCTCTCCAGTGTGGAGGTCTATGATTCAGAAACTGACAAGTGGACATTGATTGAGAGCCTTCGTCGGCCGAGACGAGGTTGCTTCGCGTGTGGATTCGAGGGGAAGCTCTACGTGATGGGTGGAAGGTCGAGTTTTACAATTGGAAACTCAAAATTTGTTGATGTTTACAATCCTGAAAGGCACAGTTGGTGTGAGATGAAAAATGGTTGTGTCATGGTGACTGCTCATGCAGTACTGGGAAAGAAGCTGTTCTGTATGGAGTGGAAGAATCAGAGGAAGTTGGCAATCTTCAATTCAGAGGACAATACATGGAAAATGGAGCCTCTACCTTTGACTGGGAGCTCCAGTATCGGTTTCCGGTTCGGAATTCTTGATGGTAAACTCTTGCTGTTCTCACTGGAGGAGGAACCTACATGCAAAACTTTGTTGTATGATCCAAATGCAGCCCCTGGATCGGAGTGGCAAACAAGTGAGATCAAACCATCTGGGTTATGCTTGTGCAGTGTAACAGTCAAAGCATGA 1161 0.4582 MPGCIAGKKWFTEPNMCFSNLPNKENQTLSKSKHSVRSELSDKDDDSSILPRLPDDVSKYCLALVPHSDLPAMAGVCKRWRCFIQSKEFIMVRKLAGLVEEWLFLLTADKEGKGSHWEVMDCEGQNRRSLPPMPGPTKAGFGVVVVNGKLLVMAGYSVIDGTATASAEVYQYNSCVNSWSRLSNMNVARYDFACAEVNGLVYAVGGNGVDGDSLSSVEVYDSETDKWTLIESLRRPRRGCFACGFEGKLYVMGGRSSFTIGNSKFVDVYNPERHSWCEMKNGCVMVTAHAVLGKKLFCMEWKNQRKLAIFNSEDNTWKMEPLPLTGSSSIGFRFGILDGKLLLFSLEEEPTCKTLLYDPNAAPGSEWQTSEIKPSGLCLCSVTVKA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04528 386 SUPERFAMILY F-box domain 36 89 IPR036047 GO:0005515
Adu03g04528 386 SMART kelc_smart 200 247 IPR006652 GO:0005515
Adu03g04528 386 SMART kelc_smart 149 199 IPR006652 GO:0005515
Adu03g04528 386 SMART kelc_smart 248 293 IPR006652 GO:0005515
Adu03g04528 386 Pfam Kelch motif 188 233 IPR006652 GO:0005515
Adu03g04528 386 Pfam Kelch motif 139 186 IPR006652 GO:0005515
Adu03g04528 386 PANTHER OS02G0202900 PROTEIN 1 386 IPR045887 -
Adu03g04528 386 ProSiteProfiles F-box domain profile. 47 95 IPR001810 GO:0005515
Adu03g04528 386 MobiDBLite consensus disorder prediction 29 48 - -
Adu03g04528 386 PANTHER KELCH REPEAT F-BOX PROTEIN 1 386 - -
Adu03g04528 386 SUPERFAMILY Kelch motif 100 346 IPR015915 GO:0005515
Adu03g04528 386 MobiDBLite consensus disorder prediction 30 48 - -
Adu03g04528 386 Pfam Kelch motif 236 281 IPR011498 GO:0005515
Adu03g04528 386 Gene3D - 89 384 IPR015915 GO:0005515
Adu03g04528 386 Pfam F-box domain 51 88 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04528 Adu-Chr3 134639294 134640746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04528 53 231 Miscellaneous Gene Families AT4G33900 27.835 4.68e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04528 - - adu:107482114 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04528 03 134639294 134640746 Adu03g04528 03 134639294 134640746 ECH
Adu10g00691 10 8313350 8314852 Adu03g04528 03 134639294 134640746 PCT