Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04044 ATGCACCACATCCACCGGAGACAACCCACCGAACTCCAAATCACATTAAACGTGGCACCATCCCACCCGCTGTATGTCGTGGATGAAAATGTTGGGACAGTGAAACCCGCCAGCTGCTGGGCTGCGAGACGGAGACGGATGCAACGTGCACGGTGTCGTGTCTTCATCAGACGTTCTCGGACAGCTGGGCAGCGGACAATGGTGATCTTCGCAGCGTCAGTACGGAGAGAGTGGAAAAGACTGCTGGAGAAGAAGAAACTGCAGCACCACGTATGCACTGTGCGCGAAGAGGGTGTCTTCATCGGACGTTCTCGAACAGTTGAGCGGCGTCGAGTTGCGTTCTGGGCCGCGGACGGTGCGGCATCAGTGTGGagagtgttgggcttgggcctcacaaaggagagaaaaacccaacaaatctcccccttcttgactagGTGGTGGATCCTCACGCTGAGGAAAACACTCCCTCCTTCCCCTCTCCTCTCTCTGTCTACAACCATGGCGGATCGAGACAATGGCGATGTACTGATGCTGGAAGCTCCACCTTCTTATGGGCGCCAAGCATGTTCTTCCCACGCGGAAATCATCGACGCTTTGCCTTACATCGACTCCGACTACGCCGACCCCAAAGTGAAGTTCGAGGTTGACCGTCTCGTGGAGGAAGAAATGCGCCGCAGTACCAAGATGCCTGCTGACTTCCTCAAAGAATTACCCCCACTTCCCACCTTGAATTTTGAGGAGTACCCAATGGTTGGTAGAGAGTACGAGCGTGTAAGAGCCGGAAGGCCTCCCGTTACTCTTGATAGGTCGCGTTATGAATTTGAAGTGCCAGCTGCCAATAAGAGGAACGATGAAACTGCTTGGAAGCAAGCACTTCGGAGATCTCAACGCCTTCTTCAATATCAGAATATCAGGATGGAAAATGTGGATTTGTTGTTAAAATATGGCACCGATGCCTGGAAACAACACAACAATCGATTGGAAGTATATTTGACAAGAATGCAGAAATTAGCTCAGGAACTTGGTGAAAAGATTGAAAATGTAAATCGTGAAAGGAAATATCATCAGCAAAATACTGCTTGCGAGCTCAATGCTTTGTCCATGCAATGGAAGGATCTGTGTCAGAAAAATATAGACATCCAAATTGCTTGCGCTTCTCTTGAAGCTCGCATAAAAGAACTGAAAACAGAAGCAGCAGAACGAGGTTGGAACCTGGAAGCCATCACAGAAAATAGACCGTTGTCGATTTCAGAAAACTTCTGA 1266 0.4708 MHHIHRRQPTELQITLNVAPSHPLYVVDENVGTVKPASCWAARRRRMQRARCRVFIRRSRTAGQRTMVIFAASVRREWKRLLEKKKLQHHVCTVREEGVFIGRSRTVERRRVAFWAADGAASVWRVLGLGLTKERKTQQISPFLTRWWILTLRKTLPPSPLLSLSTTMADRDNGDVLMLEAPPSYGRQACSSHAEIIDALPYIDSDYADPKVKFEVDRLVEEEMRRSTKMPADFLKELPPLPTLNFEEYPMVGREYERVRAGRPPVTLDRSRYEFEVPAANKRNDETAWKQALRRSQRLLQYQNIRMENVDLLLKYGTDAWKQHNNRLEVYLTRMQKLAQELGEKIENVNRERKYHQQNTACELNALSMQWKDLCQKNIDIQIACASLEARIKELKTEAAERGWNLEAITENRPLSISENF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04044 421 Coils Coil 332 359 - -
Adu03g04044 421 Coils Coil 378 398 - -
Adu03g04044 421 PANTHER BCAS2 PROTEIN 189 403 IPR008409 GO:0006397
Adu03g04044 421 PANTHER PRE-MRNA-SPLICING FACTOR SPF27 189 403 - -
Adu03g04044 421 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 195 401 IPR008409 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04044 Adu-Chr3 129525150 129530389 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04044 K12861 - gmx:100783349 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04044 03 129525150 129530389 Adu03g04044 03 129525150 129530389 ECH