Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04030 ATGGCGGCAGTCACAGCCCCTCAGCAGCACCGCTCCTCCAAGACGGAGTCCTACGTCGACAACAAGCGCAAGGAGGACATCCGACATGCTAACATTGTCGCTGCACGCGCCGTCGCCAGTGCCGTCAGGACCTCCCTTGGCCCCAAAGGCATGGACAAGATGATCTCCACTTCCTCCGATGAGGTGATCATCACCAACGACGGCGCCACCATCCTGAACAAGATGCAGGTCCTCCAGCCCGCCGCGAAGATGCTTGTCGAGCTCTCCAAGTCACAGGACTCTGCCGCCGGAGACGGCACTACCACCGTCGTCGTCATCGCCGGCGCACTCCTTGAGCAGTGTCTAATCCTTCTCTCACACGGCATCCACCCCACGGTCATCTCAGATTCCCTCCACAAGGCCTCGCTGAAGGCCCTCGACGTTCTCTCCGCCATGGCCGTCCCCGTTGAGCTCTCTGACAAGGACTCCCTCGTCAAGTCTGCCAGCACTTCGCTAAACAGTAAGGTCGTCAGCCAGTACTCGACGCTCCTCGCCCCTCTCGCCGTCGACTCCGTGCTCTCCGTTGTAGACCCTGCCACCCCTGACATGGTCGATCTCCGCGACATCAAGATCGTCAAGAAGCTTGGCGGAACAGTCGACGATACTGAACTTGTGAGGGGTCTCGTTTTTGACAAGAAGGTCAGCCATGCTGCCGGTGGACCTACCCGCATGGAGAATGCCAAGATTGCTGTCATTCAGTTCCAGATTTCGCCCCCTAAGACCGACATTGAGCAGAGTATAGTGGTGAGTGATTATTCTCAGATGGATAGGATTCTGAAGGAAGAGAGGAGCTATATTTTGGGCATGATTAAGAAGATTAAGGCCACTGGCTGTAATGTGTTGTTAATTCAGAAGAGTATTCTGAGAGATGCTGTTACTGATTTGTCTTTGCATTACCTTGCTAAAGCTAAGATTTTGGTGATTAAGGATGTTGAGAGGGATGACATTGAGTTTATTACCAAAACTTTGAATTGCTTGCCCATTGCCAACATTGAGCACTTCCGTGCTGAAAAGTTGGGCCATGCTGACCTTGTGGAGGAGGTTTCGCTTGGGGATGGTAAGATTGTGAAGATTACTGGGATTAAGGATATGGGGAAGACCACTACCGTGCTTGTCCGCGGGTCCAACCAGCTGGTGCTGGATGAGGCGGACAGGAGTCTGCATGATGCCTTGTGTGTTGTTAGGTGTTTGGTTGCGAAGAGGTTTCTGATTGCTGGTGGCGGTGCTCCCGAGATTGAGCTTTCAAGGCAACTTGGTGCCTGGGCTAAGGTTTTGCATGGGATGGAGGGTTACTGTGTTAGAGCTTTTGCTGAGGCGCTCGAAGTCATTCCTTATACTTTGGCTGAGAATGCAGGTTTGAACCCCATTGCAATTGTGACTGAGCTGAGGAATCGGCACGCGCAGGGAGAGATCAATGCCGGAATCAATGTGAGGAAGGGTCAGATTACCAACATCTTGGAGGAGAATGTGGTGCAGCCACTGCTGGTTGGTACTCATGCAGAAACTTTAGATCTCTGCTGCAGTGATGTCATCCACTTGGATATGACGAGACTTTATTGA 1599 0.5253 MAAVTAPQQHRSSKTESYVDNKRKEDIRHANIVAARAVASAVRTSLGPKGMDKMISTSSDEVIITNDGATILNKMQVLQPAAKMLVELSKSQDSAAGDGTTTVVVIAGALLEQCLILLSHGIHPTVISDSLHKASLKALDVLSAMAVPVELSDKDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSVVDPATPDMVDLRDIKIVKKLGGTVDDTELVRGLVFDKKVSHAAGGPTRMENAKIAVIQFQISPPKTDIEQSIVVSDYSQMDRILKEERSYILGMIKKIKATGCNVLLIQKSILRDAVTDLSLHYLAKAKILVIKDVERDDIEFITKTLNCLPIANIEHFRAEKLGHADLVEEVSLGDGKIVKITGIKDMGKTTTVLVRGSNQLVLDEADRSLHDALCVVRCLVAKRFLIAGGGAPEIELSRQLGAWAKVLHGMEGYCVRAFAEALEVIPYTLAENAGLNPIAIVTELRNRHAQGEINAGINVRKGQITNILEENVVQPLLVGTHAETLDLCCSDVIHLDMTRLY 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04030 532 CDD TCP1_delta 20 516 IPR012717 GO:0005524|GO:0006457|GO:0016887|GO:0051082
Adu03g04030 532 Gene3D - 35 513 IPR027413 -
Adu03g04030 532 Pfam TCP-1/cpn60 chaperonin family 38 510 IPR002423 GO:0005524
Adu03g04030 532 TIGRFAM chap_CCT_delta: T-complex protein 1, delta subunit 20 520 IPR012717 GO:0005524|GO:0006457|GO:0016887|GO:0051082
Adu03g04030 532 Gene3D - 148 414 IPR027410 -
Adu03g04030 532 SUPERFAMILY GroEL equatorial domain-like 21 512 IPR027413 -
Adu03g04030 532 ProSitePatterns Chaperonins TCP-1 signature 3. 92 100 IPR002194 GO:0005524|GO:0006457|GO:0016887|GO:0051082
Adu03g04030 532 PRINTS Tailless complex polypeptide 1 (chaperone) signature 40 56 IPR017998 GO:0140662
Adu03g04030 532 PRINTS Tailless complex polypeptide 1 (chaperone) signature 416 428 IPR017998 GO:0140662
Adu03g04030 532 PRINTS Tailless complex polypeptide 1 (chaperone) signature 62 80 IPR017998 GO:0140662
Adu03g04030 532 PRINTS Tailless complex polypeptide 1 (chaperone) signature 92 111 IPR017998 GO:0140662
Adu03g04030 532 PRINTS Tailless complex polypeptide 1 (chaperone) signature 382 404 IPR017998 GO:0140662
Adu03g04030 532 SUPERFAMILY GroEL apical domain-like 214 387 IPR027409 -
Adu03g04030 532 MobiDBLite consensus disorder prediction 1 22 - -
Adu03g04030 532 SUPERFAMILY GroEL-intermediate domain like 151 412 IPR027410 -
Adu03g04030 532 ProSitePatterns Chaperonins TCP-1 signature 1. 43 55 IPR002194 GO:0005524|GO:0006457|GO:0016887|GO:0051082
Adu03g04030 532 PANTHER T-COMPLEX PROTEIN 1 SUBUNIT DELTA 13 520 - -
Adu03g04030 532 Gene3D GroEL 219 378 IPR027409 -
Adu03g04030 532 PANTHER CHAPERONIN 13 520 IPR017998 GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04030 Adu-Chr3 129379638 129381842 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g04030 210 428 EF-hand Containing Proteins AT3G14270 24.051 3.90e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04030 K09496 - gmx:100786888 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04030 03 129379638 129381842 Adu03g04030 03 129379638 129381842 ECH