Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04025 ATGTCCCTCCGCAGCGAATCGACTGACCACTGGAGGGTGGCGTCCCCGGCATTGAGGGGCGCCGAAAACGCCGTCCCCGGGTGCGCATACGGTGGCGCGGTTTCGAGCCAGAGACTGAGGGTGAACCCGATCAGAGACCACGTATCGGAATCGTACGATGAATTGGAGTTGGATTTCAGCCCTTCGATTTTCAGCTCTCTGGAGAAGCACCTTCCGATGAATATGCTCAATGCACCTCGCGGGGACAAGCTCAAGTACCTCAGAACCATTCTCCTGGACTATCTTCCTCCTGCCGCTCGCATTAGGGACCAAAAGTATAGAGAATACACACAGATGATACTATCAAATTATAAGCCTCTCAATAAAGAGTTGTACGCTATGAATCCTACAGCATTCTTTGTCCCAGCATTCCTGAAAGCAATTAGTGATAATAATGAAGACAGCTTTAGAAGTATAGTTTCTGAGCCCTTCCCTGGCATTTTTACATTTGAAATGCTTCAGCCACACTTTTGTGAATTGCTGTTATCTGAGGTTGAAAGCTTTGAGAGGTGGGCTTTCAAAACAAAATTTCAGATTATACGTCCCAATACAATGAATAAGTATGGTACTGTACTTGATGACTTTGGCCTTCAAACTATGCTTGCCAAGCTTAGAGAAAATTTCATTAGTCCTTTGTCTAAAGTGTTTTTTGCAGAACTTGGTGGATCAACCTTGGATGCTCATCATGGGTTTATTGTGGAATATGGCAAAGATAGAGATATTGACTTAGGTTTCCATGTGGATGATGCAGACATAACCTTGAATGTTTGCTTGGGCAAGCAATTTTCTGGAGGGGAATTGTTTTTTCGGGGCATGCGTTGTGATAAACATATAAATACAGAAAGTATTGCAGAGGAGATCTTTGATTATTCGCATGTCCCTGGACAAGCTGTCCTTCATCATGGTCGTCATCGCCATGGTGCTAGAGCCACTACATGGGGTCATCGGGTTAACCTAGTTCTTTGGTGCCGAAGTTCTGCTTTTAGAGAGCTGCAAAGGTATAAATCAGATTTCTCTAGCTGGTGTAATGTGTGCACTCGTCAGAAGAAAGAACGGCAGCGCAAAACAATAGATATTACCAGCTTGGATTTGTTCAAATGGAAAGATCCGAGAGGCACCGACATTCGCATCTCAATTAAAGATAATGAAGATTCGGAAGTGACAAGCGTAGATGCGTCGTCATCTCCGAGGAGGGCAGTGTACTACGTTCAGAGTCCATCACACGATGGCGAGAAGACAACGACGTCGTTCCAATCGACGCCGGTGCTCAGCCCAATGGGATCCCCACCGCACTCCCAGTCGTCCATGGGCCGCCACTCTCGCCAGTCCTCGTCGAGCCGCTTCTCCGCTTCCCGCAAGCTCATCAACAAGAAGAAGGATCAGATCGACTCCATCATCGAAGAAGAAGGCCTTCTCCAATCCGAACATGACGCGCGTGTCCACACTCGCCGCTACTATTTTCTCGCTTTCCTCCTCTCCTTCTTCCTTCTCTTCACCCTCTTCTCTCTCATCCTCTGGGGTGCCAGCAGGCCCATGAAGCCCAACATCTTCGTCAAGAGCATCAAGTTTGACCATCTGAGAGTTCAAGCTGGTTCTGATGCTACGGGTGTGAACACTGACATGATCACCATGAATTCTACCGTCAAATTCACTTACCGTAACACTGGCACATTCTTCGGGGTCCATGTGGCATCAACACCTTTAGATCTATCATATTCGGAAATCGTAATTGCTTCCGGCGATATGAGGAAGTTCTACCAGTCAAGGAAGAGTCAAAGGGTGGTGAGCGTGGCAGTGATGGGGAACAAGATCCCCTTGTATGGAAGCGGCGCAAGCCTTAGCAGCTCAACGGGGATGCCAACGGTGCCGGTGCCATTGAAACTCAGCTTTGTGGTTAGATCCAAGGCCTACGTTCTTGGCAAATTGGTGAAGCCCAAATATTACAAGAGGATTGATTGTTCCATCACTTTGGATCCCAACAAGATCATTGACCTTCCCACTTTTTGCCTCAACTGTAGTATGAGATCACCATCACCTTTGATTTTTTTCTTTCGAAAAAGAATTCAGTTTTATCCACCATTTTAA 2124 0.4675 MSLRSESTDHWRVASPALRGAENAVPGCAYGGAVSSQRLRVNPIRDHVSESYDELELDFSPSIFSSLEKHLPMNMLNAPRGDKLKYLRTILLDYLPPAARIRDQKYREYTQMILSNYKPLNKELYAMNPTAFFVPAFLKAISDNNEDSFRSIVSEPFPGIFTFEMLQPHFCELLLSEVESFERWAFKTKFQIIRPNTMNKYGTVLDDFGLQTMLAKLRENFISPLSKVFFAELGGSTLDAHHGFIVEYGKDRDIDLGFHVDDADITLNVCLGKQFSGGELFFRGMRCDKHINTESIAEEIFDYSHVPGQAVLHHGRHRHGARATTWGHRVNLVLWCRSSAFRELQRYKSDFSSWCNVCTRQKKERQRKTIDITSLDLFKWKDPRGTDIRISIKDNEDSEVTSVDASSSPRRAVYYVQSPSHDGEKTTTSFQSTPVLSPMGSPPHSQSSMGRHSRQSSSSRFSASRKLINKKKDQIDSIIEEEGLLQSEHDARVHTRRYYFLAFLLSFFLLFTLFSLILWGASRPMKPNIFVKSIKFDHLRVQAGSDATGVNTDMITMNSTVKFTYRNTGTFFGVHVASTPLDLSYSEIVIASGDMRKFYQSRKSQRVVSVAVMGNKIPLYGSGASLSSSTGMPTVPVPLKLSFVVRSKAYVLGKLVKPKYYKRIDCSITLDPNKIIDLPTFCLNCSMRSPSPLIFFFRKRIQFYPPF 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04025 707 Pfam Late embryogenesis abundant protein 563 656 IPR004864 -
Adu03g04025 707 MobiDBLite consensus disorder prediction 416 463 - -
Adu03g04025 707 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 34 379 - -
Adu03g04025 707 SMART p4hc 158 337 IPR006620 GO:0005506|GO:0016705|GO:0031418
Adu03g04025 707 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 34 379 - -
Adu03g04025 707 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 239 338 IPR005123 -
Adu03g04025 707 Gene3D q2cbj1_9rhob like domain 160 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04025 Adu-Chr3 129330609 129336381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04025 - - twl:120016595 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g02711 05 94608064 94612856 Adu03g04025 03 129330609 129336381 ECH
Adu03g04025 03 129330609 129336381 Adu03g04025 03 129330609 129336381 ECH
Adu03g04025 03 129330609 129336381 Adu05g02711 05 94608064 94612856 PCT