Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g04024 ATGGGGAGTCCGGGACTGAGCAATCGAAATAATGGACAGCAGCAACGATTAGGCATTACTGAGCCCATTTCATTGGGCGGACCAACTGAGTATGATGTGATCAAGACTCGGGAACTCGAAAAGTACTTGCAAGATGCTGGCTTGTACGAGAATCAGGAGGAGGCAGTTAGTAGGGAGGAAGTTCTTGGCAGGCTAGATCAGATTGTGAAGATTTGGGTCAAAACCATTAGCCGTGCAAAGGGACTCAATGACCAACTGGTGCAAGAAGCAAATGCCAAGATTTTCACCTTTGGCTCCTATCGATTAGGGGTCCATGGCCCTGGAGCTGATATAGACACGCTTTGTGTGGCACCTAGGCATGTATCCAGAGAAGAAGATTTCTTTGGTGAACTACATAGGATGCTGTCTGAGATGCCAGAAGTAACAGAGTTGCACCCTGTGCCTGATGCTCATGTTCCAGTGATGGGGTTCAAGTTCAATGGTGTTTCTATTGATCTCCTTTATGCAAGATTGTCTTTGTGGGTTATTCCTGAGGACTTGGATATATCACAGGAGTCAATATTACAAAATGCAGATGAACAAACTGTTCGTAGTCTTAATGGTTGTAGAGTGACTGATCAAATCCTGCGTTTGGTTCCAAATATTCAGAATTTTCGCACAACATTGAGATGCATGAGATTTTGGGCAAAGCGACGTGGTGTCTATTCAAATGTTTCTGGTTTTTTGGGTGGTATAAACTGGGCATTGCTGGTTGCTCGAATATGTCAGTTATTTCCAAATGCACTTCCAAATATGTTAGTGTCTAGGTTCTTTAGGGTGTATACTCAGTGGCGTTGGCCGAACCCTGTCCTGCTTTGTGCTATTGAAGAAGGATCTCTTGGACTCCAAGTTTGGGATCCTAGAAGATATCCCAAGGATAGATTCCATCTAATGCCGATAATTACTCCTGCTTATCCTTGCATGAACTCTAGCTACAATGTTTCATCAAGTACATTGCGTATTATGACAGAGGAGTTTCAGAGGGGAAATGAAATATGTGAGGCAATGGAGGCGAACAATGCCAATTGGGATGCTCTTTTTGAGCCTTATCCATTTTTTGAAGCTTATAAGAATTATCTGCAGATAGATGTTTCAGCAGAGAATGCTGATGATCTTAGAAAATGGAAGGGCTGGGTTGAGTCCCGCCTCCGCCACTTGACATTGAAGATTGAGCGGCACACATATGGCATGCTTCAGTGCCATCCACATCCTGGTGATTTTTCAGACAAATCTAAGCCTTTCCACTGTTCCTACTTCATGGGTTTGCAACGTAAGCAAGGAGTTCCCGTGAATGAAGGCGAACAATTTGATATAAGACATACCGTTGAAGAATTTAAGCATTCTGTCAACATGTATACTTTGTGGAAACCAGGAATGGCTATCCAGGTATCCCATGTGAAACGGCGTAGCATACCGAACTTTGTTTTTCCTGGTGGCGTTCGACCTTCCCGGCCAACTAAAGCAACTTGGGACAGTAAGCGAAGTTCAGAATTAAGGGATTCCGTACATGGTCAGACAGAGAAGTCTCAAGAAGGACAAGCAGTTGCCTTGAGAGAAGCCGATGAAAGGAAGAGAAAGCGAGCGGAGGACAGCATTGATAACTTAAGAACTTCCAAGTCTTTTGCATCTTTACCTCCCTCCAGCGGGGATGTTCATGATGACTCGAGAAATCCTGTTAGCATTGCTAGTTCTTGTTCTATGAAATGCGATGAATCAGAAGTCAACAGTGTGAATGAGAAGCCTGATTTGAAATCTTTAACGGGAAGTCCTTCCAGGCATGGCGAGACCAATGGATCAGCAAGAAGCATCCAACAAGTCAACCATATGCTTACTGGCATTAATACATGTAATTCTAAAGAAGCAGAAAATCTAGCCATTGAAAAGATCATATCTGGTCCATATGATACACATCAAGCCTTACCAGAAGAACCTGACGAGCTTGAAGATGATGTTGAGTACAGAAATCAATTTAAAAATTTAGGTGGGAACATAAACAAGAGCAACTTGGACTCTTCACATTCAGAGCTGGCAGTGGTAGGCGAACCAGTTATTACTGAGAAGGAAACCTCTTGTTCAAATCATTTACTCCCCAATGAGAGCTTGGAGGAGCTAGAGCCTGCTGAGCTGACAGCTCCATTCATAAGTTCTACAGCTGCACCTCTGCCCCAGAGGAAGCCTCTTATCAGGTTGAACTTCACCTCTCTAGGAAAAGCTGCTGACAAAAGTTCCTAG 2271 0.4368 MGSPGLSNRNNGQQQRLGITEPISLGGPTEYDVIKTRELEKYLQDAGLYENQEEAVSREEVLGRLDQIVKIWVKTISRAKGLNDQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVAPRHVSREEDFFGELHRMLSEMPEVTELHPVPDAHVPVMGFKFNGVSIDLLYARLSLWVIPEDLDISQESILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLFPNALPNMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRYPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMTEEFQRGNEICEAMEANNANWDALFEPYPFFEAYKNYLQIDVSAENADDLRKWKGWVESRLRHLTLKIERHTYGMLQCHPHPGDFSDKSKPFHCSYFMGLQRKQGVPVNEGEQFDIRHTVEEFKHSVNMYTLWKPGMAIQVSHVKRRSIPNFVFPGGVRPSRPTKATWDSKRSSELRDSVHGQTEKSQEGQAVALREADERKRKRAEDSIDNLRTSKSFASLPPSSGDVHDDSRNPVSIASSCSMKCDESEVNSVNEKPDLKSLTGSPSRHGETNGSARSIQQVNHMLTGINTCNSKEAENLAIEKIISGPYDTHQALPEEPDELEDDVEYRNQFKNLGGNINKSNLDSSHSELAVVGEPVITEKETSCSNHLLPNESLEELEPAELTAPFISSTAAPLPQRKPLIRLNFTSLGKAADKSS 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g04024 756 SUPERFAMILY Nucleotidyltransferase 18 211 IPR043519 -
Adu03g04024 756 MobiDBLite consensus disorder prediction 1 20 - -
Adu03g04024 756 PANTHER POLY A POLYMERASE 1 682 - -
Adu03g04024 756 MobiDBLite consensus disorder prediction 487 612 - -
Adu03g04024 756 Pfam Poly(A) polymerase predicted RNA binding domain 422 496 IPR007010 GO:0003723|GO:0043631
Adu03g04024 756 Pfam Poly(A) polymerase predicted RNA binding domain 365 423 IPR007010 GO:0003723|GO:0043631
Adu03g04024 756 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 364 490 IPR011068 GO:0003723|GO:0016779|GO:0031123
Adu03g04024 756 MobiDBLite consensus disorder prediction 527 547 - -
Adu03g04024 756 MobiDBLite consensus disorder prediction 1 24 - -
Adu03g04024 756 Gene3D Beta Polymerase, domain 2 50 206 IPR043519 -
Adu03g04024 756 MobiDBLite consensus disorder prediction 566 585 - -
Adu03g04024 756 MobiDBLite consensus disorder prediction 592 612 - -
Adu03g04024 756 Gene3D Poly(A) polymerase predicted RNA binding domain 364 479 - -
Adu03g04024 756 CDD NT_PAP_TUTase 58 212 - -
Adu03g04024 756 Pfam Poly(A) polymerase central domain 18 362 IPR007012 GO:0004652|GO:0043631
Adu03g04024 756 Pfam Nucleotidyltransferase domain 85 169 IPR002934 GO:0016779
Adu03g04024 756 MobiDBLite consensus disorder prediction 500 519 - -
Adu03g04024 756 Gene3D - 18 360 - -
Adu03g04024 756 PANTHER POLY(A) POLYMERASE-LIKE PROTEIN 1 682 - -
Adu03g04024 756 Coils Coil 531 551 - -
Adu03g04024 756 SUPERFAMILY PAP/OAS1 substrate-binding domain 213 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g04024 Adu-Chr3 129314675 129319564 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g04024 K14376 - gmx:100816915 1148.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04024 03 129314675 129319564 Adu03g04024 03 129314675 129319564 ECH