Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03880 ATGTTGGACGGCCGTTCCTGTGTGGTTCCGAGGTTGTTTCCCAGCTCCTACCAGGCAGAAAACAAGTGGCCTTTCATGACATATCTGCCTGACTTGGACATCAAGAACGGCAAGCGCCCTTTGGAAAATGATGTCAATGATGAACCCAATCCCAGGAAGGTTAATAGCAAGAGATTGGGTTCTCGCCGCCTCCGAGGTGAAGCCAATCGAGTTTTGTTTCAACAGCAGCCTTATCAGATTGAGGATTCTGTTGTTCCAAAAATTGATGAGGACGTTGATGATGGTGTTGATAGTGATGATGATGACTCTACCATGCAGGATCACAGGAATGATTTTGTGCTGCTGAGTGGTCTCCAAATAGATGAAGATGCTCTAGCTCATTCTGCTGAGCTGTTAGCTGAACATGACAAGTATCAAGCCAGGGATTCATTGGAGTCCGGTTTCCATCAATCTGATGAGCAGCAGGAGAATCAATCCAAGCATTTTTCTGATTCTGGAGTTCAGCAATCTGACGAGATGCAGCTGCTTGCTGCAAATTTGTCAAATTCCAGTGACCAGCCATCTGATCAGCAGCAAGAGAATCATTCCGGTGATTCATCGGATTCTGGTTCCCTTCTGCCTAGAATGAACAGAGACAGCTCGATTGCCTGTCTCAGCCGCTGTTCGAGGTCCGATTATGGTTCTCTTGCATCACTGAACTCAAGCTTTCGCAACATTATTCGAAGTGGTGAGCTATACAAGTGGAGGAGACTGAATGGAATCATAGAACACTGGGTTTACTTTTCCTGTGCCCTCCTTGAATGGGAGGCCTATGATCCGATTCGCGAAAGGTGGATGCATTTGCCTAGGATGGCTTCTAACGAATGCTTCATGTGTTCGGACAAGGAGTCCTTGGCTGTTGGTACTGAACTACTTGTGTTTGGGAGGGAGCTGAGATCCCATGTCATTTACAGATACAGTCTTTTGACGAATTCATGGTCTTCGGGAATGCGGATGAATGCTCCAAGATGCTTGTTTGGATCTGCTAGCCTTGGAGAGATTGCAATTTTGGCCGGTGGGTGTGATTCCGAGGGACGTATTCTGGACTCTGCTGAACTGTATAATTCCGAGAATCAACAATGGGAAATGCTCCCACCCATGAAAAAGCCTAGGAAGATGTGCTCTGGAGTATTCATGGATGGAAAGTTCTATGTGATTGGTGGAATTGGTGGAAGCGAGTCTAAGCTTCTTACCTGTGGTGAGGAGTACAATCTACAGACTAGGACATGGACAGAAATTCCTAGCATGTCCCCAGGACGCAATGCTAGGGGAGCCGAGATGCCTGCAACAGCCGAGGCGCCACCTCTGGTTGCTGTTGTAAATAATGAATTATATGCTGCTGATTATGCTGACATGGAGGTTAAGAAGTACGATAAAGAGAGAAAAGTGTGGAATACCATTGGGAGACTTCCGGAACGAGCAGTGTCAATGAATGGCTGGGGTCTTGCATTCAGGGCATGCGGAAATCGGCTAATCGTGATAGGTGGACCTCGGACACATGGTGGGGGTTTTATTGAACTCAACTCGTGGGTGCCGAGCGAAGGACCTCCCCAATGGAACCTACTGGCCAGGAAACGGTCTGGTAACTTTGTCTATAACTGTGCCGTGATGGGATGTTGA 1659 0.4744 MLDGRSCVVPRLFPSSYQAENKWPFMTYLPDLDIKNGKRPLENDVNDEPNPRKVNSKRLGSRRLRGEANRVLFQQQPYQIEDSVVPKIDEDVDDGVDSDDDDSTMQDHRNDFVLLSGLQIDEDALAHSAELLAEHDKYQARDSLESGFHQSDEQQENQSKHFSDSGVQQSDEMQLLAANLSNSSDQPSDQQQENHSGDSSDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNSSFRNIIRSGELYKWRRLNGIIEHWVYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRELRSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSENQQWEMLPPMKKPRKMCSGVFMDGKFYVIGGIGGSESKLLTCGEEYNLQTRTWTEIPSMSPGRNARGAEMPATAEAPPLVAVVNNELYAADYADMEVKKYDKERKVWNTIGRLPERAVSMNGWGLAFRACGNRLIVIGGPRTHGGGFIELNSWVPSEGPPQWNLLARKRSGNFVYNCAVMGC 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03880 552 MobiDBLite consensus disorder prediction 83 107 - -
Adu03g03880 552 SUPERFAMILY Kelch motif 265 549 IPR015915 GO:0005515
Adu03g03880 552 MobiDBLite consensus disorder prediction 181 207 - -
Adu03g03880 552 Pfam Kelch motif 383 430 IPR006652 GO:0005515
Adu03g03880 552 Pfam Kelch motif 335 380 IPR006652 GO:0005515
Adu03g03880 552 Coils Coil 552 552 - -
Adu03g03880 552 MobiDBLite consensus disorder prediction 37 59 - -
Adu03g03880 552 MobiDBLite consensus disorder prediction 147 168 - -
Adu03g03880 552 SMART kelc_smart 395 443 IPR006652 GO:0005515
Adu03g03880 552 SMART kelc_smart 303 346 IPR006652 GO:0005515
Adu03g03880 552 SMART kelc_smart 347 394 IPR006652 GO:0005515
Adu03g03880 552 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 552 - -
Adu03g03880 552 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 552 - -
Adu03g03880 552 Gene3D - 259 538 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03880 Adu-Chr3 127661991 127665579 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03880 - - gmx:100791897 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03880 03 127661991 127665579 Adu03g03880 03 127661991 127665579 ECH