Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu03g03855 | ATGGGGCTAGCTCTTGGTTGTCTTCAAGTGGACCAGTCAACGGTAGCTATCAAGGAAGTTTTTGGGAAGTTCGATGATGTGCTTGAACCCGGTTGCCACTTTGTGCCTTGGTGTCTTGGCAATCAAGTAGCTGGTTACCTTTCTTTGCGTGTGCAGCAGCTTGATGTTTGTTGCGAAACCAAGACGAAGGACAACGTCTTTGTCACCGTTGTTGCTTCTATCCAATATCGAGCACTTGCAGAAGGTGCCGTAGATGCATTTTACAAGCTTAGCAATACCAGAGCACAGATTCAAGCCTATGTCTTTGATGTTATTAGGGCAAGTGTTCCAAAGATGGAACTAGACGCCTCTTTTGAACAGAAGAATGAAATTGCGAAAGCTGTAGAGGAAGAACTTGAAAAGGCAATGTGTGCTTATGGCTATGAGATAGTTCAGACTCTTATTGTGGATATCGAACCAGATGAGCATGTCAAGAGAGCCATGAACGAGATAAATGCTGCTGCGAGATTGAGGGTGGCTGCAAATGAGAAGGCCGAGGCGGAGAAGATTCTGCAGATTAAGAGAGCAGAAGGAGAAGCGGAGTCGAAGTATCTAGCAGGGCTTGGAATAGCCCGTCAACGCCAAGCCATAGTTGATGGCCTGAGGGACAGCGTGCTAGCCTTCTCAGAGAATGTCCCTGGGACAACATCAAAGGATGTCATGGACATGGTTCTGGTCACCCAATATTTTGATACATTGAAGGAAATCGGTGCATCCTCAAAATCCAATTCTGTTTTCGTTCCACATGGACCGGGAGCTGTTAAAGATATTTCTTCACAAATTAGAGAAGGTCTTCTTCAAGGAAATGTGGCTTAA | 855 | 0.455 | MGLALGCLQVDQSTVAIKEVFGKFDDVLEPGCHFVPWCLGNQVAGYLSLRVQQLDVCCETKTKDNVFVTVVASIQYRALAEGAVDAFYKLSNTRAQIQAYVFDVIRASVPKMELDASFEQKNEIAKAVEEELEKAMCAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLRVAANEKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTTSKDVMDMVLVTQYFDTLKEIGASSKSNSVFVPHGPGAVKDISSQIREGLLQGNVA | 284 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu03g03855 | 284 | Gene3D | Band 7 domain | 41 | 167 | IPR036013 | - | |
| Adu03g03855 | 284 | PANTHER | STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL | 1 | 284 | - | - | |
| Adu03g03855 | 284 | Coils | Coil | 118 | 138 | - | - | |
| Adu03g03855 | 284 | Coils | Coil | 157 | 190 | - | - | |
| Adu03g03855 | 284 | SUPERFAMILY | Band 7/SPFH domain | 45 | 171 | IPR036013 | - | |
| Adu03g03855 | 284 | CDD | SPFH_like_u4 | 10 | 278 | - | - | |
| Adu03g03855 | 284 | SMART | PHB_4 | 5 | 165 | IPR001107 | - | |
| Adu03g03855 | 284 | Pfam | SPFH domain / Band 7 family | 9 | 182 | IPR001107 | - | |
| Adu03g03855 | 284 | PANTHER | BAND 7 DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 284 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu03g03855 | Adu-Chr3 | 127352102 | 127354982 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Adu03g03855 | - | - | egr:104453980 | 500.745 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Adu03g03855 | 03 | 127352102 | 127354982 | Adu03g03855 | 03 | 127352102 | 127354982 | ECH |