Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03815 ATGGACTCTCCAAGACACGTTCTGCTCTTCTTTTTCTTCTTCCTTGTTCCCACATGCTTCTCCAATGAATGTTTGTGTTCGAACCAAACCTCTTCTAATTCTTATTATTATTCATCATCATCATCATCATCACTGCAAGATGAGATTGTAGAGCTTGCAAACAGGGCAAGCATGTTGAAGTGGATGAAGAGAATAAGGAGGGAAATACATGAACACCCTGAGGTTGCATATGAAGAGTTCAACACAAGTGCTCTCATAAGACATGAGCTTGATCAACTTGGTGTCTCTTACCAGTGGCCTGTGGCTAACACTGGTGTTGTTGCAAAGATTGGTTCTGGGGATCCTCCTTTTATTGCTCTCCGAGCTGACATGGATGCTTTGCCTATTCAGGAACTGGTTGATTGGGAGCATAAGAGCAAAGTTGATGGCAAAATGCATGCTTGCGCGCATGATGCACATGTAGCTATGCTCCTTGGAGCTGCAAAAATATTGCAAGAAATGAAGGACAAGTTGCTGGCCACTGTGATCCTAATATTCCAACCAGCTGAGGAAAGAGGCACAGGAGCAAGGGACATTATCGCCGAAAAGGTGCTGGAAGATGTGGCAGCTGTTTTTGGCCTGCACCTGGTGCCGGAGTATCCCTTAGGAGTTGTGGCGTCGCGGCCGGGAGAGTTCTTGGCCGGTTGTGGAAGCTTCAAAGCTAACATAAATGGAAAAGGCGGAGCTTGCCTCGATCCTGTTTTGGCTGCTTCAACATCAGTGATTAGCTTGCAAAACATCGTTTCAAGGGAGACAGATCCTTTAGATTCTCAGGTGCTTTCCGTGGCCATGGTGAATGCAGGATCTTCCCTGGACATAATCCCCGATTCAGCCACCATTGGAGGCACTTACAGAGCATTCAGCAGAAAGAGTTTCTATTGGCTAAAGAAAAGGATCGAAGAGGTAATCATAGCGCAGGCAGAAGTACACAGGTGCAGCGCGGAGGTTATTTTCAACGGCGATGAGCATCCAACAATCCCTCCGACGAGAAACGACGAGAGAATATATGAAGTGGTTAGGGAAGTTTCAGGCATGATTGTAGGAAAGGAGAACACAGAAGTAGCACCGGTGTTCACCGGAAGTGAAGATTTCGCGTTTTACTTGGAGAAGGTACCTGGAGCTTTCGTTCTGGTTGGAATGAGAAATGATGAGACTGGATCCATTCACCCTGCTCATAGTCCTTACTATGTCGTCGACGAAGACGCGCTTCCGATTGGTGCTGCATTGCATGCAGCATTTGCTCTCTCCTTCCATTCTTATTCAACAAATTCTTACATTTGA 1320 0.4629 MDSPRHVLLFFFFFLVPTCFSNECLCSNQTSSNSYYYSSSSSSSLQDEIVELANRASMLKWMKRIRREIHEHPEVAYEEFNTSALIRHELDQLGVSYQWPVANTGVVAKIGSGDPPFIALRADMDALPIQELVDWEHKSKVDGKMHACAHDAHVAMLLGAAKILQEMKDKLLATVILIFQPAEERGTGARDIIAEKVLEDVAAVFGLHLVPEYPLGVVASRPGEFLAGCGSFKANINGKGGACLDPVLAASTSVISLQNIVSRETDPLDSQVLSVAMVNAGSSLDIIPDSATIGGTYRAFSRKSFYWLKKRIEEVIIAQAEVHRCSAEVIFNGDEHPTIPPTRNDERIYEVVREVSGMIVGKENTEVAPVFTGSEDFAFYLEKVPGAFVLVGMRNDETGSIHPAHSPYYVVDEDALPIGAALHAAFALSFHSYSTNSYI 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03815 439 SUPERFAMILY Zn-dependent exopeptidases 56 430 - -
Adu03g03815 439 CDD M20_IAA_Hyd 62 430 IPR044757 GO:0009850|GO:0016787
Adu03g03815 439 PIRSF Amidohydrol_AmhX 48 433 IPR017439 GO:0016787
Adu03g03815 439 PANTHER PEPTIDASE M20 FAMILY MEMBER 8 437 IPR017439 GO:0016787
Adu03g03815 439 Pfam Peptidase family M20/M25/M40 119 427 IPR002933 GO:0016787
Adu03g03815 439 SUPERFAMILY Bacterial exopeptidase dimerisation domain 227 340 IPR036264 -
Adu03g03815 439 TIGRFAM amidohydrolases: amidohydrolase 63 419 IPR017439 GO:0016787
Adu03g03815 439 Gene3D - 227 340 - -
Adu03g03815 439 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 2 8 437 - -
Adu03g03815 439 Gene3D Zn peptidases 63 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03815 Adu-Chr3 126806654 126809283 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03815 K14664 - gmx:100780711 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03815 03 126806654 126809283 Adu03g03815 03 126806654 126809283 ECH