Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03782 ATGGATCCGATCTTAAATCCGTTCTCTTCAGGCACGCGTCTCAGGGACATGATTCGGGCCATACGTGCTTGCAAAACTGCAGCAGAAGAGCGTGCTGCCATTAGAAAAGAATGTGCTGCCATTCGTACTTCAATCAATGAAAACGATCCAGACTATAGGCATCGCAATCTGGCTAAGCTTATGTTCATCCACATGCTTGGCTACCCTACGCATTTTGGTCAAATGGAGTGCCTGAAGTGTATAGCATCTCCCGGATTTCCAGAGAAGAGAATAGGTTACCTTGGCCTTATGCTGCTCCTTGATGAAAGACAAGAAGTGCTAATGTTGGTCACCAATTCTTTGAAACAAGATCTTAATCACATGAATCAGTATATAGTAGGACTTGCTCTTTGTGCTTTAGGAAACATATGCTCAGCAGAAATGGCTCGTGATCTTGCACCTGAGGTTGAGAGACTGCTGCAATTTCGAGATCCAAATATTCGGAAGAAGGCAGCATTGTGCTCTATACGAATCATAAAGAAAGTTCCAGACTTGGCGGAAAACTTTGTCAAGCCTGCTACTGCCTTGCTTAAGGAGAAGCATCATGGAGTTTTGATCACTGCAGTTCAGCTTTGTGCAGATTTGTGTAAAGTTAGCAGAGAAGCTCTTGAACATATTCGAAAGAAATGCACAGAGGGTTTGGTGAGAACTCTTAAGGATCTAGCGAACAGTTCTTATTCACCAGAGTATGATGTTTCTGGCATCACAGACCCGTTTCTTCATATCAGATTGCTCAAGTTGTTGCGATTGCTGGGTGAAGGTGATGCCGATGCTAGTGACTCTATGAATGACATACTTGCCCAGGTGGGTACGAAGACCGAGTCAAATAAAGTTGCTGCGAATGCCATTTTATATGAGTGCGTTCAAACAATAATGAGCATTGAAGGTAATGGTGGCTTGCGTGTGCTTGCCATCGGTATCCTAGGAAAATTCTTGTCAAACCGTGACAACAATATCAGATATGTGGCATTAAACATGCTGATGAAAGCTGTAACTGCTGATCCTCAGGCAGTGCTTAGGTATCGTGCAACAATTCTGGAATGTGTGAAGGATGCTGATGCTTCAATTCGGAAAAGAGCCCTTGAACTTGTTTATGTTCTGGTGAATGAAAGTAATGTGAAGCCCCTAACGACAGAGCTAGTATCTTATCTGGAAACCTGCGATCAGGATTTCAAGGGGGACCTTACTGCTAAAATTTGCTCAATAGTTTCAAAGTTTTCACCGGAGAAAATCTGGTATATTGATCAGATGATCAAGGTTTTGTTGGAGGCTGGAAGTTTTGTAAAGGATGAAGTGTGGCGTGCCCTAATTGTTGTTATAAGCAATGCTTCAGAGCTTCATGGATATGCAGTAAGAGCATTATACAAGGCATTTCAAAAGTCAAATGAACAGGAAGCCTTCACTCGTGTTGCAATATGGTGCATTGGAGAGTATGGTGACTTGTTAATAAATAATGTTGGAATGCTTGACCTTGAAGATCGAATAACAGTGACTGAGTCAGATGCTGTGGATCTTATAGAGATTACTATACAATGCCATGCATTGGATTTTACCACAAAAGCAATGGCTTTGGTTGCCCTATTAAAGCTCTCTTCACGATTCCCTTCTTGTTCAGAGAGGATCAGGGAAATAATTGTTAAGTACAAAGGGAACTTTGTGCTAGAGTTGCAGCAAAGATCTATAGAATTCAATTCAATTATTGCCAGACATCAAAATATTAGGTCTATGCTTGTAGAAAGGATGCCAGTTTTGGATGAGGCAACTTTCATTGGTCGCCAGGCTGGGTCTCTGCCTGATGCAGGTTCCATTTCGGCAGGATCTTCTGTGAGTCTTCCAAACGGGGTAGCCAAACCTGCAGACTCTCTTGTAGATCTGCTAGATCTAAATTCAAATGATGCTCCCACACCAAGCTCTTCTGGTGGGGATTTTCTTCAGGACCTTCTTGGTGTCGATCTGTCACCGGCAGCACAATCGGGTGCTAACCAAACTTCAAAAAGTGGCACAGATGCTCTTTTGGATCTCTTGTCTGTTGGATCAGTGTCTGGACCTGTTGAATCACCTTCTGCACAAAGCAATTCTTCTGCCATGGACATTTTATCTGCCAGTAAAAGTGAAAAAGCATCCGTTTCACCATTAGATGATCTCTCATCACTCTCACTATCTTCAAGAACAACTTCAATCACTGGAGCTGCTCCAATGATGGATTTGTTGGATGGTTTTGCATCCACCCCACCGAAAAGTGAAAACAATGGGACAGTTTATCCATCTATAACTGCATTCGAGAGCAGCTCCTTGCAGTTGACATTCAATTTCTCAAAACAGCCAGGAAACTCACAAACAACGAATATCCAAGCTACCTTCATAAATTTGTCCTCTGATGAATACACAGATTTTATTTTTCAGGCAGCAGTTCCAAAGTTTCTGCAGCTGCAATTAGATCCAGCTAGCGGCAGTACTCTCCCTGCCAACGGAAATGGTTCAATCACTCAAAATTTTCGAGTTACCAATAGCCAAAATGGAAAGAAATCTCTTGTAATGCGCATAAGGATAACATACAAGATAAATGGCAAGGAGAAACTGGAGGAGGGACAAATCAGTAATTTTCCTCGTGATTTATGA 2658 0.4225 MDPILNPFSSGTRLRDMIRAIRACKTAAEERAAIRKECAAIRTSINENDPDYRHRNLAKLMFIHMLGYPTHFGQMECLKCIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHMNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIKKVPDLAENFVKPATALLKEKHHGVLITAVQLCADLCKVSREALEHIRKKCTEGLVRTLKDLANSSYSPEYDVSGITDPFLHIRLLKLLRLLGEGDADASDSMNDILAQVGTKTESNKVAANAILYECVQTIMSIEGNGGLRVLAIGILGKFLSNRDNNIRYVALNMLMKAVTADPQAVLRYRATILECVKDADASIRKRALELVYVLVNESNVKPLTTELVSYLETCDQDFKGDLTAKICSIVSKFSPEKIWYIDQMIKVLLEAGSFVKDEVWRALIVVISNASELHGYAVRALYKAFQKSNEQEAFTRVAIWCIGEYGDLLINNVGMLDLEDRITVTESDAVDLIEITIQCHALDFTTKAMALVALLKLSSRFPSCSERIREIIVKYKGNFVLELQQRSIEFNSIIARHQNIRSMLVERMPVLDEATFIGRQAGSLPDAGSISAGSSVSLPNGVAKPADSLVDLLDLNSNDAPTPSSSGGDFLQDLLGVDLSPAAQSGANQTSKSGTDALLDLLSVGSVSGPVESPSAQSNSSAMDILSASKSEKASVSPLDDLSSLSLSSRTTSITGAAPMMDLLDGFASTPPKSENNGTVYPSITAFESSSLQLTFNFSKQPGNSQTTNIQATFINLSSDEYTDFIFQAAVPKFLQLQLDPASGSTLPANGNGSITQNFRVTNSQNGKKSLVMRIRITYKINGKEKLEEGQISNFPRDL 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03782 885 SUPERFAMILY ARM repeat 29 597 IPR016024 -
Adu03g03782 885 Gene3D - 5 598 IPR011989 -
Adu03g03782 885 PIRSF AP1_gamma 10 885 IPR017107 GO:0005794|GO:0016192|GO:0030121
Adu03g03782 885 Gene3D - 753 884 - -
Adu03g03782 885 Pfam Adaptin N terminal region 31 582 IPR002553 GO:0006886|GO:0016192|GO:0030117
Adu03g03782 885 SMART alpha_adaptinc2 762 882 IPR008152 GO:0006886|GO:0016192
Adu03g03782 885 Pfam Adaptin C-terminal domain 768 882 IPR008152 GO:0006886|GO:0016192
Adu03g03782 885 ProSiteProfiles Gamma-adaptin ear (GAE) domain profile. 765 882 IPR008153 -
Adu03g03782 885 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 9 885 - -
Adu03g03782 885 SUPERFAMILY Clathrin adaptor appendage domain 744 884 IPR013041 -
Adu03g03782 885 PANTHER AP-1 COMPLEX SUBUNIT GAMMA 9 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03782 Adu-Chr3 126515624 126527887 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03782 K12391 - gmx:100817075 1362.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01498 05 25110634 25121468 Adu03g03782 03 126515624 126527887 PCT