Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03780 ATGGGTAAGAATCTCTTGATTCTTCTTGGTCTCACTCTCTTGCTTCTCTTATTTGGAACCTTCTCAGTCTCAGCTGCACCATCCACTACTTCCCCTGCTAAAATTGTTACTGGTTTTCTCTCCAATGCTGTGCCAGCTTTCACCAAGTGGGTGTGGTCCCTCAAGGCAACAACAAAAACGGCGGTTTCCAGCAGGTCGATGATGAAGTTTGAGAGTGGTTACAATGTGGAGACAGTGTTTGATGGAAGCAAGCTTGGAATTGAGCCTTATTCTGTTGAGTTGTTGCCCAATGGGGAGCTTCTCATTCTGGATTCTTCCAACAGCAACCTTTACAGGATCTCATCTTCACTTTCTTTGTATAGCAGACCGAAGCTGGTCGCGGGCTCTGCGGAAGGTTATACTGGACATGTTGATGGAAAGCACAGGGAGGCTAGGATGAACCATCCGAAGGGGATAACGGTTGATGACCGAGGGAATATCTATGTTGCAGATACTACTAACATGGCAATTAGGAAAATTAGTGATTCAGGGGTTACTACAATTGCAGGAGGAAAATGGATTCGTGGAGGGGGCCATGTTGATGGACCAAGTGAAGAAGCTAAGTTTTCTGATGACTTTGACGTGGTTTATGTTGGTAGTAGTTGTTCCTTACTTGTCATAGACAGAGGAAACCGAGCGATCAGGGAAATTCAACTTCACTTTGATGACTGTGCCTATCAATATGGTAGCGGATTCCCACTTGGGATTGCAATGCTTGTTGGGGCCGGCTTCTTTGGTTATATGCTGGCATTGTTGCAGCGAAGACTCGGTACAATTGTTGGTTCACAGGATGATCAGGTCCAAGTGATGTCTTCCGTTTCACCTAGTCCTTTTCAACAGCCCATGAAATCTGTGAGGCCTCCCTTGATTCCATCCGAATTCGAACCTGAAAAGCAAGAGGAAGGCTTCTTTGGGTCCCTTGGAAAGCTACTTGCCAATGCCTCTGCATCAATGGTGGAGATAATGGGAGGAATATTTCCTGTTTTCAGAAGAAAACCACAAAGCTACAAGTTTCAAAGACAACCTCTGGTCCCACTGCAACATCAAAAGCAAGCTTGGCCGGCGCAGGAAAGTTTCGTGATTCCTGATGGAGATGAGCCTCCTTCTATAGACATGAGAACCCCAACCCCTCGAAAAACATACCCTTTCATGTCTAAAGACGCCGAGAAAATGCAGCAATTAAGGCAAAGTAGAGCATTTTACAATGGATGGGACGGTGATCTTCAGCAGCAGCAACAACCACAAAGACATCATCATCGTCATCAGTATCAGTCATCGACCCCTCACACTTACTTCGAGCAAAGCCGCGAGACAACCAATGAGATAGTGTTCGGGGCGGTGCAGGAACAAGATGGTAAGGAGGAGTCTGTGGTAATCAAGCCTGTGAACTATGGTGACTCGCTATATGAACATCACAATATCCGGTCTAGAGTGAATTCCATGGGTTATACCCACAGGTATTGA 1503 0.4597 MGKNLLILLGLTLLLLLFGTFSVSAAPSTTSPAKIVTGFLSNAVPAFTKWVWSLKATTKTAVSSRSMMKFESGYNVETVFDGSKLGIEPYSVELLPNGELLILDSSNSNLYRISSSLSLYSRPKLVAGSAEGYTGHVDGKHREARMNHPKGITVDDRGNIYVADTTNMAIRKISDSGVTTIAGGKWIRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLVIDRGNRAIREIQLHFDDCAYQYGSGFPLGIAMLVGAGFFGYMLALLQRRLGTIVGSQDDQVQVMSSVSPSPFQQPMKSVRPPLIPSEFEPEKQEEGFFGSLGKLLANASASMVEIMGGIFPVFRRKPQSYKFQRQPLVPLQHQKQAWPAQESFVIPDGDEPPSIDMRTPTPRKTYPFMSKDAEKMQQLRQSRAFYNGWDGDLQQQQQPQRHHHRHQYQSSTPHTYFEQSRETTNEIVFGAVQEQDGKEESVVIKPVNYGDSLYEHHNIRSRVNSMGYTHRY 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03780 500 MobiDBLite consensus disorder prediction 422 448 - -
Adu03g03780 500 Pfam NHL repeat 147 172 IPR001258 GO:0005515
Adu03g03780 500 PANTHER NHL REPEAT PROTEIN 1 500 - -
Adu03g03780 500 MobiDBLite consensus disorder prediction 372 395 - -
Adu03g03780 500 Gene3D - 38 231 IPR011042 -
Adu03g03780 500 PANTHER - 1 500 - -
Adu03g03780 500 SUPERFAMILY NHL repeat 75 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03780 Adu-Chr3 126504099 126506938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03780 - - gmx:100781836 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03780 03 126504099 126506938 Adu03g03780 03 126504099 126506938 ECH