Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03772 ATGGCACTAATTTGGCAACTCAAGCTTCTCTTCTCACCTCTCTTAATAATCTTATTAGCAAACGTGGTTTCTTCACGCACTAGGCCCTTCACAGCTCCAACTGTGACACCCTTGACTAATTCCTTCCCTCGTGTCCCAATTGATCCTAATTTTTCTAATGCTTTTGGGGCCTCCAATATCAAGCTTCTTGCTAATGGGACCATGGCCACTCTGGCTCTCGACAAACTCTCAGGCTCCGGATTAGTGTCCAAAAGCAGTTACTACTATGGATTCTTCAGTGCTGCAATCAAATTACCAGCTGGTATATCATCTGGAGTTGTAGTTGCCTTCTATTTGTCTAATGCAGATAAATTCCCTCATAACCATGATGAGATTGATATCGAACTTCTTGGGCATGACAAGAGGAACGATTGGGTTATCCAAACAAATGTGTATGCTAATGGAAGCGTGAGCACTGGAAGAGAAGAAAAGTTCTACTTCTGGTTCGACCCGACAAAGCAGTACCATTACTATAGCATCTTGTGGAACAGTTATCATACAGTGTTCCTAGTGGACAACATTCCAGTGAGGGAATTCATACACGGGTCTGTTTTCCCATCAAAACCGATGTCGGTGTATGCAACAATATGGGATGGTTCAGAATGGGCCACACATGGTGGAAAATACCCTGTTGATTACAAGTATGCACCATTTGTTGTTTCATTCTCAGAGATGCAACTCGCTGGCTGCACTTCTGATCCATTAGCATGCTCTAAATCCACCCCTTCTTCTGGTGTAGACCCTGTTAATGGACCTCAATTTACCAAGCTATCCCCACAACAGATGGCAGCACTTGATTGGGCTAGAAAGAAGCTCATGTTTTACTCCTATTGTACTGACAAGAACAGATATAAAGTCATGCCACCAGAATGCCACTAA 918 0.4325 MALIWQLKLLFSPLLIILLANVVSSRTRPFTAPTVTPLTNSFPRVPIDPNFSNAFGASNIKLLANGTMATLALDKLSGSGLVSKSSYYYGFFSAAIKLPAGISSGVVVAFYLSNADKFPHNHDEIDIELLGHDKRNDWVIQTNVYANGSVSTGREEKFYFWFDPTKQYHYYSILWNSYHTVFLVDNIPVREFIHGSVFPSKPMSVYATIWDGSEWATHGGKYPVDYKYAPFVVSFSEMQLAGCTSDPLACSKSTPSSGVDPVNGPQFTKLSPQQMAALDWARKKLMFYSYCTDKNRYKVMPPECH 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03772 305 SUPERFAMILY Concanavalin A-like lectins/glucanases 48 304 IPR013320 -
Adu03g03772 305 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 40 235 IPR000757 GO:0004553|GO:0005975
Adu03g03772 305 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 33-RELATED 1 305 - -
Adu03g03772 305 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 268 304 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Adu03g03772 305 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 1 305 IPR044791 GO:0004553
Adu03g03772 305 Gene3D - 32 304 - -
Adu03g03772 305 CDD GH16_XET 45 304 IPR016455 GO:0010411|GO:0016762|GO:0042546
Adu03g03772 305 PIRSF EndGlu_transf 11 305 IPR016455 GO:0010411|GO:0016762|GO:0042546
Adu03g03772 305 Pfam Glycosyl hydrolases family 16 56 227 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03772 Adu-Chr3 126395369 126397952 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g03772 1 305 Glycoside Hydrolase AT1G10550 59.494 2.87e-138 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03772 K08235 - gmx:100778993 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03772 03 126395369 126397952 Adu03g03772 03 126395369 126397952 ECH