Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03744 ATGCCGCGGCCGTGGACGGGGAAGGCCCCGCTGAAGAGCAAGAAGGACAAGGAGAAGAAGGTGAGGCTGCTGGAGTCATTGAACCCGCCGCGTCCCGATACCAATGGGGTGAAGCAGTTGGAGATGGCGAAGCCATTGAAGCTTGGTCAATACTCCAGGGATGGGAAGTCGAGGGAGGAGATACTCGGCGACCCCTTGAGGAAATGGGAGATAAGGATGCTTGTTAAGCCTATGGTCTCTGATAATCGCCAGGTTAATCTCGGAAGGGATGGATTAACACATAACATGTTGGAGTTGATACATTCGCATTGGAAGCGTAGCCCTGTCTGTAAAATTCGTTGTAAAGGGGTTCCAACTGTAGATATGAAAAATGTCTGTCACCACATTGAGGATAAAACAGGGGGGAAAATAATTCTTAGAGTTGGTGGTGTTGTTTATCTTTTCCGTGGAAGAAACTACAACTATAGTACACGCCCACTGTATCCAGTGATGCTCTGGAAGCCTGCTGCACCTGTTTACCCAAAACTTATACAAGCTGCTCCAGGAGGATTAACAAAATCTGAAGCTGAGGAACTACGTCTGAAAGGGAAAAGTCTTTTGCCAATATGTAAATTAGCCAAAAATGGAGTCTACACTTCGCTTGTAAAGGATGTCAGAGAGGCTTTTGAAGGAAGCCCTTTGGCGAAGATTGACTGCAAGGGACTGGAGCCTAGCGACTACAAGAAATTAGGTGCCAAGCTTAAGGATTTGGTTCCTTGTGTTCTGCTGTCTTTTGATGATGAACAAATATTGATGTGGAGAGGCAAAGATTGGAAATCAATGTTCCCACAACCTCCTCCACTTTCTCGTCCTTCAGAAGCTGGCATTACAGGGAATTCGGACAGTACAGGGGAGACTGAAGATGATAATCAATCTGAACATGAGGGCAACGTGGTGAACACAAGCCCAAAAATGTTGTCTCTGTGGAAGCGTGCAATCGAGTCGAGCAAAGCTTTGTTGCTGGATGAGTTCAATCTTGGTCCTGATGCCCTCTTGGAGAAGGTAGAAGAATTCGAAGGGGTTTCGCAGGCCGTGGAGCACTCCTATCCAGCATTGATTTTATCTAATGAGAATGATGCTAAAGGTTCAATTGCAAGCTTTGAAGATGACATAGAAGACAGCTATTCCAGTCAGGATGGCTTGGCTACTGAAGACGAAGGCGATGTCGACAATGATGATGATTTCCTTGAAGATGACTTGTTTGATGTTGTGGACTCATCTGCGGAACCCGGATCATTACCTATTGATTTTGTTGTCAACAAGCTGAAACCAAAACTAGAAGAATAA 1326 0.4563 MPRPWTGKAPLKSKKDKEKKVRLLESLNPPRPDTNGVKQLEMAKPLKLGQYSRDGKSREEILGDPLRKWEIRMLVKPMVSDNRQVNLGRDGLTHNMLELIHSHWKRSPVCKIRCKGVPTVDMKNVCHHIEDKTGGKIILRVGGVVYLFRGRNYNYSTRPLYPVMLWKPAAPVYPKLIQAAPGGLTKSEAEELRLKGKSLLPICKLAKNGVYTSLVKDVREAFEGSPLAKIDCKGLEPSDYKKLGAKLKDLVPCVLLSFDDEQILMWRGKDWKSMFPQPPPLSRPSEAGITGNSDSTGETEDDNQSEHEGNVVNTSPKMLSLWKRAIESSKALLLDEFNLGPDALLEKVEEFEGVSQAVEHSYPALILSNENDAKGSIASFEDDIEDSYSSQDGLATEDEGDVDNDDDFLEDDLFDVVDSSAEPGSLPIDFVVNKLKPKLEE 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03744 441 Gene3D - 184 278 IPR035920 -
Adu03g03744 441 PANTHER CRS2-ASSOCIATED FACTOR 2, CHLOROPLASTIC 1 436 - -
Adu03g03744 441 Gene3D - 66 159 IPR035920 -
Adu03g03744 441 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 1 436 IPR044599 GO:0000373
Adu03g03744 441 SUPERFAMILY YhbY-like 184 274 IPR035920 -
Adu03g03744 441 ProSiteProfiles CRM domain profile. 182 278 IPR001890 GO:0003723
Adu03g03744 441 MobiDBLite consensus disorder prediction 275 312 - -
Adu03g03744 441 MobiDBLite consensus disorder prediction 1 37 - -
Adu03g03744 441 MobiDBLite consensus disorder prediction 377 408 - -
Adu03g03744 441 Pfam CRS1 / YhbY (CRM) domain 69 149 IPR001890 GO:0003723
Adu03g03744 441 Pfam CRS1 / YhbY (CRM) domain 184 267 IPR001890 GO:0003723
Adu03g03744 441 ProSiteProfiles CRM domain profile. 64 160 IPR001890 GO:0003723
Adu03g03744 441 MobiDBLite consensus disorder prediction 9 26 - -
Adu03g03744 441 SMART CRS1_YhbY_2 66 149 IPR001890 GO:0003723
Adu03g03744 441 SMART CRS1_YhbY_2 184 267 IPR001890 GO:0003723
Adu03g03744 441 SUPERFAMILY YhbY-like 65 158 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03744 Adu-Chr3 126045110 126049203 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03744 - - adu:107481137 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03744 03 126045110 126049203 Adu03g03744 03 126045110 126049203 ECH