Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03290 ATGTCTATCACACAAAGCCTCTCCACTCCGCTCTCTTCTTCTTCCTCAACTTTCCTTGCTCCCTCCACCTTCAATCCCAGGAGTCAGGTGACGTTGCCCGTGAAGAGCTTGGGCGTTTGCAAATGCATTGCGGCACCACAAGAAGCTGATACCGCCTACAAGACGAAGGTCTCTCGCAATGGAAATATTGCTAAACTTCAAGCCGGGTATCTCTTTCCGGAGATTGCTAGAAGAAGGAATGCACACTTGCTTAAGTACCCTGATGCCAAAGTAATAAGCCTTGGAATTGGTGATACTACTGAACCCATTCCTGATGCCATAACTTCTGCAATGTCAAAGAGATCACATGCATTATCAACCGTAGAAGGATATAGTGGTTATGGAGCTGAACAAGGTGAAAGGCCATTAAGAAGTGCAATTGCTTCAACATTTTACCGTGATCTTGGCATTGAAGATGATGATATATTTGTGTCAGATGGAGCAAAGTGTGATATATCTCGCCTTCAGATTGTCTTTGGGTCAAAAATTAAAATGGCTGTGCAAGACCCATCATACCCGGCCTATGTAGACTCGAGTGTAATTATGGGCCAGACTGGCTACTACCAGAAGGATGTTGAGAAGTTTGCAAACATCGAATACATGCGATGTAACCCAGAAAATGGTTTTTTCCCTGATTTGTCTTCTATTTCTCGACCAGATATAATCTTTTTCTGCTCACCAAACAACCCTACTGGTGCTGCGGCAACAAGAGAGCAATTGACCCAACTTGTTAAGTTTGCTAAGGACAATGGGTCTATAATAATCTTTGATTCAGCATATGCAATGTACATCTCTGGTGACAATCCGCGCTCGATCTTTGAAATTCCCGGAGCCAAAGAGGTTGCCCTTGAGGTTTCATCATTTAGCAAGTATGCCGGGTTCACTGGAGTTCGACTGGGTTGGACTGTGATTCCGAAGCAGTTGTTGTTTTCTGATGGATTTCCTGTTGCCAAGGACTTCAATCGTATTGTATGTACTTGCTTCAATGGTGCATCAAATATTTCCCAGGCTGGTGGTCTGGCTTGCCTTTCACCAGATGGCCTTAAGGTCAGTTATTTAGTTTATTAG 1107 0.4381 MSITQSLSTPLSSSSSTFLAPSTFNPRSQVTLPVKSLGVCKCIAAPQEADTAYKTKVSRNGNIAKLQAGYLFPEIARRRNAHLLKYPDAKVISLGIGDTTEPIPDAITSAMSKRSHALSTVEGYSGYGAEQGERPLRSAIASTFYRDLGIEDDDIFVSDGAKCDISRLQIVFGSKIKMAVQDPSYPAYVDSSVIMGQTGYYQKDVEKFANIEYMRCNPENGFFPDLSSISRPDIIFFCSPNNPTGAAATREQLTQLVKFAKDNGSIIIFDSAYAMYISGDNPRSIFEIPGAKEVALEVSSFSKYAGFTGVRLGWTVIPKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPDGLKVSYLVY 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03290 368 Pfam Aminotransferase class I and II 90 328 IPR004839 GO:0009058|GO:0030170
Adu03g03290 368 PANTHER LL-DIAMINOPIMELATE AMINOTRANSFERASE, CHLOROPLASTIC 9 362 - -
Adu03g03290 368 Gene3D - 101 356 IPR015421 GO:0003824
Adu03g03290 368 SUPERFAMILY PLP-dependent transferases 59 361 IPR015424 -
Adu03g03290 368 CDD AAT_like 92 360 - -
Adu03g03290 368 TIGRFAM DAPAT_plant: LL-diaminopimelate aminotransferase 58 362 IPR019942 GO:0008483
Adu03g03290 368 PANTHER AMINOTRANSFERASE 9 362 IPR019942 GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03290 Adu-Chr3 119297804 119302893 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03290 K10206 - gmx:100801405 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03290 03 119297804 119302893 Adu03g03290 03 119297804 119302893 ECH