Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03062 ATGCCGTGCCAGGACTCGGAGCTGAAGGCGGCGAAGACTGCGTACCGGAGCGCCAGGGTTGAGGGTAACCACCGCGAGGAGGCGCGTTGGGCCAACGTCATTGGCGACATTCACAAGAACAGAGGAGAGTACGTGGAAGCCCTCAAATGGCTCCGAATCGATTACGATGTTTCGCTAAAATACTTGCTGGAAAAGGATTTGCTCCCTACCTGCCAATCCATCGGCGAGATGTACCTCCGCCTCGAGCAGTTCTCTGAAGCTCTAACTTACCAGAAGAAGCACTTGGAGCTTGCAAGAGACGCTGACGATGTGGTTGAGCAGCAAAGAGCGAGCACGCAGCTAGGTCGAACATACCACGAGCTGTTCTCGAGATCCGATCACGACCACAACTCAATTCGCAACGCGAAGAAGTATTTCAACTTCGCAATGGAGCTTGCAGTGGCTCTGAAGAAGAAACCGCCAAGCAGCAAGTCTTCGTTCCTGAAGGAGTATATCGATGCGCACAACAACAAAGGGATGCTGGAAATGGAGCTCGATAACTTCCAGGAAGCGAAGGAGATACTAACTCGAGGGTTGGAAATTTGTGATGAGGAGGAGGTTAGTGAATTTGATGATGGGAGGAGCAGGCTCCACCATAACCTTGGGAATGTGTACATGGAACTCAGGAATTGGAATGAAGCTAGGAGGAATATCAAAATGGACATTCAGATTTGTAACAAGATTGGCCACCGTCAAGGGGAAGCGAAAGGGTATATCAATCTTGGGGAATTGCATTCCAGGACTCAGAAGTATGAGGAGGCAATCTGTTTTTATAACAAGGCACTTGGTTTGGCAAGGTCCTTGGAGGATGAGGATGCTTTGGTGAGGCAAATTGAGCAGAATATTAGGACTGTAAAGGAAGCTGTCAAAGTGATGGATGAGATAAAGAAGGAAGAGCAGAACCTCAAGAAGCTTAAAAGAGATATCGCCGCTGCCAGAGGGACACCTAATGAGCGGAAATGCCTGCTCCAGCAGAATGGCTCTCTTGAACGCCTTGTGGAGAAGTCAAGAATGATATCTGCATGGGAGAAGCATTGCGAATTTGCAAAGGAGAAAAAGAGAATAGCAAGTGAACTTTGTGACAAGCAAAGGCTTGGTGATTCATATATGGATGTTGGAGAATCATATCAGAAGCTTAGAAAATTCAACAAAGCAATCAAATGGTACAAGAAGAGTTGGGAAATGTACCAAACAATTGGCAGTTTAGAGGGTCAAGCATTGGTAAAAATCAATATTGGCAATGTTTTGGATTCTGCTCAAAAGTGGAGACAAGCATTAGATGCATATACTGAAAGCTATAGGATTGCTGTTGAAGCTCAACTTCCTGATATACAGCTTTCTGCATTAGAAAATATGCATTATAGTAACATGATAAGATTTGATGATGAATCTGAGACAAAGAGGTTGAAAATTTTAATTGATAAGCTGAAGAACTCAATAGAAGATGAGTCAGGTGCTAAAAATATGGCAGAAGATTGTTGCTCTGAGACTGATACTGAGGCAGACAATAATCTGTCAATAGCTGGGTCTGATGATGACCTTTGCTCTCCACATACCAGTTCTAGATCAAAAGCTCTATCTACTGGAGAAGAATTTATAGATGACATGCCGCTTCTGTCAATCTATCAGTCCTTAAAAGGCTCATCCAGAAAGACAACAGGTCACATGGAAGATCTTACCAACACCAAGCAAGCTGATAAGTCATCCAAAAGTCTTACAAATTTAACCGGCAATCATCAGGCAGTTGTTGGACGTAAACGTGTCCGTGTAATTCTTTCTGATGATGAAGATGAGATGGAGTGTTCAAGCAAACGGAGTCATGATTGCGTGTTAGAAGACAGGTCTACTTATGATGCAAATATGAGTAAAGTGAGTCCTAGTAACATTAAGGTTGTCTCAGAGAATGGATCCAAACTTCCAATTAATGTTGAAGAAAGTAGCAGTTCTTTCAAATGCTGGAGTCCACATACACTTGCTAAAACTTGCAGACATTCCAGATCCATGAGCAATGACCTAGTTGCTGAACTTGATCTTCCTAGTGGTTCTAAATGCAACACAGATGCCTCTGGTAAACCAAGTGATGCTGCCCCTCCTGCGTCAAATAGTTCTCAATACGATAAATATATTGAGTGCCAGATTGGGAATGATCTAATTCACATAGAAGCAACCTGGTGTACTGCCAGTGATAAGCTGGATATTGAATCTTTGAAAGCTGTAGCTGCATGCTTATACTATCTACAACTTCCTACACAAAAGAGATCAGATGGTCTGTTGCCTGTTGTTCAGCACATTTTATGTGCTGGAAGAGATCTAGAATCCCTAGAAACTGTTGAAAACCTTCAGATATGCCTGGGAAATGTCACAGTTGAAGCATCCATTGATGGATGGATTCATAAGCGCCTCATAAAAATGTATGTAGACTTTTGCAAGCAGCTGTCAGAGAAGCCAAATATGAAGGTACTGAAGAAACTCTACAATCTAGAGGTTTCGGATGATGAAATAGTAGTGTCTGAGTGTGACCTGCAAGATTTGTCTATAACCCCATTGATAAATGCACTGCAGTCCCAAAAAGCATTTTCAATGCTTGACCTCTCTCACAATTTGTTAGGAAATGGGACAATGGAAGCACTTCAGAAGGTCTTCACAGCATCAGACCAACATTATGGTGACTTAACACTCGATTTGCATTGTAATCGATTTGGTCCAACCGCTCTGCTACAGATTTGTGAATGCTCAGTGCTGTTTGATAGACTGGAAGTGCTCAACATTTCTGGAAATCGTCTTACTGATGCATGTGGATCTTATCTTTCAACTATCTTGAAAAAATGTAAAGCCCTCTATAGCTTGAATGTAGAGAACTGCTGTATCACATCCAGAACTATTCAAAAGATTGCTGATGCACTGGACTCTACATCCGTACTTGCTTATCTCTGTATAGGACATAACAGCCCTGTATCTGGAAATACTATAGTTAATCTTTTGTCCAAGCTTTCCACTTTGAAAAGGTTTTTGGAGCTGAATCTCAGTGGTCTAAAACTAGGCAAACCAGTAGTTGATGCCCTTTGCCAGCTTGCAGGTACCTTGAGTTTATCAGGACTAATTCTTGGAGGTACCAGTATCGGAACAGAAGGGGTAATGCAATTAGCAGAACCATTGCTGAAAGGGGCTGAAGAGTTTGTGAAACTTGATCTATCATATTGTGGGCTCACATCAAACTTTGTTTCAAATATCAATGTTAATTTGTTTTGTTCCATCCTTGAGCTGAACCTGGAAGGAAATCCTATTCTGCCTGAGGGCGGAAATACTCTATGTTCTCTTCTAGTAAACCCATCATGCTCTCTCAAAGTGTTGGTTCTTAGAAAGTGTCAACTTGGGCTCGCTGGGGTTCTCCACATAATTGAGGCACTCGCAGAGAACAACAGCCTGGAGGAGCTTAATCTTGCTGATAATACTGTACCAAATGAACTTTATTCTCTAAAATCCGACTTAACAGTAAAAGGTGACACTGAAAAACACGATCAGATACTTGATACGATTAAGTTGGCGGGTAATCAAGAGGTCCATTGCTCTGTAAACTTGGACTACCATCAGCTTGAAGTTGCTGATAGTGAAGATGATACAGTTAAAGCAGCTGCTTCTGGAATAGATGACAGTGCCAGTTCGTGTCAAAGAAATTCTTCATCTGCAGAGTGCCTTTTAACTCAACAACTTGCAGTGGCTATTGGTAAGGCAAAGAAATTGCAATTACTAGACCTTAGCAACAATGCTTTTTCATCGGAAGCTGCAGAAACTTTCTATAATTCCTGGACAAGTGTACGGGTGCCAAGTCAGAAGCACATTAATGAGGGGATTATGCATTTCTCAACAAAAGAAAAGAAGTGCTGCAGAGTGAAACCGTGCTGCAAAAAAGTCCTGCCTTTATAG 3963 0.4232 MPCQDSELKAAKTAYRSARVEGNHREEARWANVIGDIHKNRGEYVEALKWLRIDYDVSLKYLLEKDLLPTCQSIGEMYLRLEQFSEALTYQKKHLELARDADDVVEQQRASTQLGRTYHELFSRSDHDHNSIRNAKKYFNFAMELAVALKKKPPSSKSSFLKEYIDAHNNKGMLEMELDNFQEAKEILTRGLEICDEEEVSEFDDGRSRLHHNLGNVYMELRNWNEARRNIKMDIQICNKIGHRQGEAKGYINLGELHSRTQKYEEAICFYNKALGLARSLEDEDALVRQIEQNIRTVKEAVKVMDEIKKEEQNLKKLKRDIAAARGTPNERKCLLQQNGSLERLVEKSRMISAWEKHCEFAKEKKRIASELCDKQRLGDSYMDVGESYQKLRKFNKAIKWYKKSWEMYQTIGSLEGQALVKINIGNVLDSAQKWRQALDAYTESYRIAVEAQLPDIQLSALENMHYSNMIRFDDESETKRLKILIDKLKNSIEDESGAKNMAEDCCSETDTEADNNLSIAGSDDDLCSPHTSSRSKALSTGEEFIDDMPLLSIYQSLKGSSRKTTGHMEDLTNTKQADKSSKSLTNLTGNHQAVVGRKRVRVILSDDEDEMECSSKRSHDCVLEDRSTYDANMSKVSPSNIKVVSENGSKLPINVEESSSSFKCWSPHTLAKTCRHSRSMSNDLVAELDLPSGSKCNTDASGKPSDAAPPASNSSQYDKYIECQIGNDLIHIEATWCTASDKLDIESLKAVAACLYYLQLPTQKRSDGLLPVVQHILCAGRDLESLETVENLQICLGNVTVEASIDGWIHKRLIKMYVDFCKQLSEKPNMKVLKKLYNLEVSDDEIVVSECDLQDLSITPLINALQSQKAFSMLDLSHNLLGNGTMEALQKVFTASDQHYGDLTLDLHCNRFGPTALLQICECSVLFDRLEVLNISGNRLTDACGSYLSTILKKCKALYSLNVENCCITSRTIQKIADALDSTSVLAYLCIGHNSPVSGNTIVNLLSKLSTLKRFLELNLSGLKLGKPVVDALCQLAGTLSLSGLILGGTSIGTEGVMQLAEPLLKGAEEFVKLDLSYCGLTSNFVSNINVNLFCSILELNLEGNPILPEGGNTLCSLLVNPSCSLKVLVLRKCQLGLAGVLHIIEALAENNSLEELNLADNTVPNELYSLKSDLTVKGDTEKHDQILDTIKLAGNQEVHCSVNLDYHQLEVADSEDDTVKAAASGIDDSASSCQRNSSSAECLLTQQLAVAIGKAKKLQLLDLSNNAFSSEAAETFYNSWTSVRVPSQKHINEGIMHFSTKEKKCCRVKPCCKKVLPL 1320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03062 1320 Pfam Tetratricopeptide repeat 208 279 - -
Adu03g03062 1320 SUPERFAMILY TPR-like 149 284 IPR011990 GO:0005515
Adu03g03062 1320 MobiDBLite consensus disorder prediction 520 540 - -
Adu03g03062 1320 Pfam Tetratricopeptide repeat 380 405 IPR019734 GO:0005515
Adu03g03062 1320 Pfam Tetratricopeptide repeat 166 194 IPR019734 GO:0005515
Adu03g03062 1320 SMART tpr_5 68 101 IPR019734 GO:0005515
Adu03g03062 1320 SMART tpr_5 379 412 IPR019734 GO:0005515
Adu03g03062 1320 SMART tpr_5 419 452 IPR019734 GO:0005515
Adu03g03062 1320 SMART tpr_5 165 198 IPR019734 GO:0005515
Adu03g03062 1320 SMART tpr_5 208 241 IPR019734 GO:0005515
Adu03g03062 1320 SMART tpr_5 248 281 IPR019734 GO:0005515
Adu03g03062 1320 SMART LRR_RI_2 869 896 - -
Adu03g03062 1320 SMART LRR_RI_2 1040 1067 - -
Adu03g03062 1320 SMART LRR_RI_2 1124 1151 - -
Adu03g03062 1320 SMART LRR_RI_2 1095 1122 - -
Adu03g03062 1320 SMART LRR_RI_2 928 955 - -
Adu03g03062 1320 SMART LRR_RI_2 1257 1284 - -
Adu03g03062 1320 SMART LRR_RI_2 956 983 - -
Adu03g03062 1320 SMART LRR_RI_2 1152 1178 - -
Adu03g03062 1320 Gene3D Ribonuclease Inhibitor 821 1293 IPR032675 -
Adu03g03062 1320 SUPERFAMILY TPR-like 375 454 IPR011990 GO:0005515
Adu03g03062 1320 PANTHER PROTEIN TONSOKU 1 1316 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Adu03g03062 1320 Gene3D Tetratricopeptide repeat domain 314 471 IPR011990 GO:0005515
Adu03g03062 1320 Gene3D Tetratricopeptide repeat domain 2 313 IPR011990 GO:0005515
Adu03g03062 1320 MobiDBLite consensus disorder prediction 562 586 - -
Adu03g03062 1320 MobiDBLite consensus disorder prediction 520 541 - -
Adu03g03062 1320 SUPERFAMILY TPR-like 23 121 IPR011990 GO:0005515
Adu03g03062 1320 Coils Coil 281 328 - -
Adu03g03062 1320 ProSiteProfiles TPR repeat profile. 379 412 IPR019734 GO:0005515
Adu03g03062 1320 ProSiteProfiles TPR repeat profile. 248 281 IPR019734 GO:0005515
Adu03g03062 1320 SUPERFAMILY RNI-like 834 1282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03062 Adu-Chr3 114923021 114931403 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03062 - - aprc:113856161 1936
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03062 03 114923021 114931403 Adu03g03062 03 114923021 114931403 ECH