Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03020 ATGGGCCATAACCAGGAGTCTCATCCAGAATCACATTTTAGAGTTCCTGCAATTGTCGATGCCCTACAAGAAATGCACCTCACTTCAAAGTTTCGTGGCTCTGAGGTAATTGAACTTCAAAATTTCGAGCCAGCTTCAGTAGATGACATTGCAAGTGTGCATGCAAGAGCTTATGTTTCTGGCCTTGAGAAGGCTATGGATCAAGCATCCGAGAAGGGTCTAATTTTCATTGATAGTTCTGGACCAACCTATGCTACTGCTACTACCTACCGGGAGTCAATTGTTGCTGCTGGTGCTGGATTAGCCTTAGTTGACTCAGTGGTTGCAGCTTCAAAGATAAGTAGAGATCCACCTACTGGTTTTGCTTTGATAAGACCACCGGGACACCATGCTGTTCCACAAGGACCAATGGGCTTCTGTGTTTTTGGAAATGTGGCCATTGCAGCTCGTTATGCTCAGCGTGTTCATGGACTAAAGCACGTCTTCATAATTGACTTTGATGTTCACCATGGAAATGGAACAAATGATGCTTTCTATGATGATCCAGATATATTTTTCCTTTCAATTCATCAAGATGGAAGCTACCCAGGTACTGGTAAATTTGACGAAGTTGGCAGCGGAGCTGGTGAAGGAACCACTCTAAATTTGCCTCTTCCTGGAGGATCAGGTGATACTACTATGAGAACAGTGTTTGATGAAGTCATTGTACCTTGTGCTCAAAGATTTAAGCCAGATATAATCCTTGTTTCTGCTGGATATGACGGGCACGTATTGGATCCACTAGCCAACCTTCAATACACAACTGGAACATATTACACGCTTGCTTCCAACATTAAACAACTATCAAAAGAGTTATGTGGAGGCAGATGCGTGTTCTTCTTAGAAGGAGGATACAACCTAAAGTCTCTTTCATACTCAGTGGCAGACACATTCCGTGCTCTTCTCGGTGACCCAAGCTTGGCATCTGAGTTTGATGACCCCAATATTTTATATGAAGAGCCATCAACAAAGGTTAAGCAAGCTATTCAGAGGATTAAATCCATTCATTCCCTGTGA 1056 0.4299 MGHNQESHPESHFRVPAIVDALQEMHLTSKFRGSEVIELQNFEPASVDDIASVHARAYVSGLEKAMDQASEKGLIFIDSSGPTYATATTYRESIVAAGAGLALVDSVVAASKISRDPPTGFALIRPPGHHAVPQGPMGFCVFGNVAIAARYAQRVHGLKHVFIIDFDVHHGNGTNDAFYDDPDIFFLSIHQDGSYPGTGKFDEVGSGAGEGTTLNLPLPGGSGDTTMRTVFDEVIVPCAQRFKPDIILVSAGYDGHVLDPLANLQYTTGTYYTLASNIKQLSKELCGGRCVFFLEGGYNLKSLSYSVADTFRALLGDPSLASEFDDPNILYEEPSTKVKQAIQRIKSIHSL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03020 351 PANTHER HISTONE DEACETYLASE 1 350 - -
Adu03g03020 351 Pfam Histone deacetylase domain 8 313 IPR023801 -
Adu03g03020 351 PRINTS Histone deacetylase superfamily signature 126 149 IPR000286 -
Adu03g03020 351 PRINTS Histone deacetylase superfamily signature 160 175 IPR000286 -
Adu03g03020 351 PRINTS Histone deacetylase superfamily signature 244 254 IPR000286 -
Adu03g03020 351 SUPERFAMILY Arginase/deacetylase 5 319 IPR023696 -
Adu03g03020 351 CDD HDAC_classII 8 315 - -
Adu03g03020 351 Gene3D Histone deacetylase domain 1 350 IPR037138 -
Adu03g03020 351 PANTHER HISTONE DEACETYLASE 14 1 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03020 Adu-Chr3 113595491 113599543 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03020 - - gmx:100788664 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03020 03 113595491 113599543 Adu03g03020 03 113595491 113599543 ECH