Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g03005 ATGTCGGTACCTGGTACCATTGATTCAAACTCAAATTCAAGTTTGTTTCTTTCTCTGCCTGATGATGTGTTTGCCATGGTGTCACGCTTCCTCTTGCCCAGAGATGTGTGTAATCTCAGCTTATGCTGCAGGAGCCTCTATGCTCTTGCAGCCTGTGAGAAAGTGTGGCTTACACAGTGTGACAGGATGGGGATAGTTCCCCATAAAGACCTTGTTGACTGGAGAACCGGTGTCTCATCATACAAGGCGATTTGCCGTTTTCTTCTCAATATTAAACCCTTGATTGGGATATGGGTTCATCAGAATCCTGAGCTTGGGAACCTTGTCTATGTCATGCCTGGTTTCGTATCGGTTGTTGGGTGTAGGATAATCCCTCAGGAGCTTGGTCCAATGGGGATTCATGATGGTCCAATCCTATGGGCTCCTGTGTTTGAAATTATTGGTGATTTTGATGGTTCACCAACATTTTTTCTTCATGGGAGGGAGAAGGGGTTGGACTATATTTGTCATGGATCATTCAAGTCCATAAACAAATCTTGCAATGTACTATTGCTTGAGGTTGAACCAAGGGAAAAATGTATAAGAAATAAGGAAAATTCTAGGTTACAAGGAGTGGTTGGAAGTAATAATAAGGCAATGGTTCCCTTCGGCAGGTTGTCTCTAAGTGATAGGAAAAAGTTGCTTGAGTTCACTACTAGGCATGTTCGGCAAGAGGTTCCTCATATGGCAATGGGACCCTTGTTTCCAAGGTTAAGGGATTGCTATGAGAATTTCCAGAAAGAATTGGTGCTGTTGAGGGGAAGAAGGGCACTCCTTAGTCAAATGTACAGGCTCGATCATAGTCAAGTTGATAACATAGAAAATTCTGAGGAGGCTGTTGGTCCTAAGCAATTAGAACAAGATGACAGAAGAAAGAGTATCGAGTGTTCAAGGGCTTTAACTATTCTTCTGGATGGGGAGGGCAGTGATGCACAATATAACAAGAGAAAAAATGGTGTAAAATTCTGGGGTAGCCTTAAACAGATGCTAGGAGGGTCTAGCTCAAACAACAGCCATCATGAGAAGAAGCATGTGCGGCTTGAAGAGTTTCTTGGATCAAATGATACAATAATGCTGACATTAAAGGCCTCAACTGTAAAATTATCTGCTTATCGAGCATGGCCAAATATGCCTGAGAGTTGGTTTGCACTTTACAAGATGCCATTGCAAGATCCAACGGAGGACCAAGTTTATGCCGGTTTATGGGGAGGAACTTTTGGTTGGCCTCCTGGAAAACCTTCCGAAGACAAGCCTGGAAAGGCTTTATTCTTTCTTCTGCTCTCTTATGAGGAGTCTCATGGACAACAGCTTCTCATTGCAACCAAAATATTGGAAGGCACACATTATGTGTTACATCCAAATGGTTCAGCAATGTTTATAGTGAATATCAACGAGCCTTCATCTGAACCATTTCCTTGGAACTCTGATGCTGACTCCTATCCGATTAATATCAAGCATTCTTTCACGGGTGAGGGTATTGCAAATGGTTACGGATTCAGATACCCTGGATCAAAGCCTGGTTCCCTCTTTGAATTTCAAGACGGTGTCCTTGCCTTCATTTGGAAGGACTCGAGGTCTGTTTTGACGTTGCAGAGACTTAACTTGCAACAGCTTTTGAAGAAGGGAGAAAGGGTGCATTGTCTGCCTCCCATCACAAATTTTTCATGCTTGACAAAATCCTACTCAAATGTGTTTACTGGATTTCCTGATGCTTACACAAGTTCATCGTCACCAAGGTAG 1779 0.4283 MSVPGTIDSNSNSSLFLSLPDDVFAMVSRFLLPRDVCNLSLCCRSLYALAACEKVWLTQCDRMGIVPHKDLVDWRTGVSSYKAICRFLLNIKPLIGIWVHQNPELGNLVYVMPGFVSVVGCRIIPQELGPMGIHDGPILWAPVFEIIGDFDGSPTFFLHGREKGLDYICHGSFKSINKSCNVLLLEVEPREKCIRNKENSRLQGVVGSNNKAMVPFGRLSLSDRKKLLEFTTRHVRQEVPHMAMGPLFPRLRDCYENFQKELVLLRGRRALLSQMYRLDHSQVDNIENSEEAVGPKQLEQDDRRKSIECSRALTILLDGEGSDAQYNKRKNGVKFWGSLKQMLGGSSSNNSHHEKKHVRLEEFLGSNDTIMLTLKASTVKLSAYRAWPNMPESWFALYKMPLQDPTEDQVYAGLWGGTFGWPPGKPSEDKPGKALFFLLLSYEESHGQQLLIATKILEGTHYVLHPNGSAMFIVNINEPSSEPFPWNSDADSYPINIKHSFTGEGIANGYGFRYPGSKPGSLFEFQDGVLAFIWKDSRSVLTLQRLNLQQLLKKGERVHCLPPITNFSCLTKSYSNVFTGFPDAYTSSSSPR 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g03005 592 Gene3D - 3 86 - -
Adu03g03005 592 PANTHER F-BOX PROTEIN FAMILY-LIKE 11 592 - -
Adu03g03005 592 SUPERFAMILY F-box domain 7 398 IPR036047 GO:0005515
Adu03g03005 592 ProSiteProfiles F-box domain profile. 13 59 IPR001810 GO:0005515
Adu03g03005 592 PANTHER F-BOX PROTEIN FAMILY-LIKE 11 592 IPR040275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g03005 Adu-Chr3 113101567 113104730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g03005 - - adu:107480208 1202.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03005 03 113101567 113104730 Adu03g03005 03 113101567 113104730 ECH
Adu03g03005 03 113101567 113104730 Adu08g02583 08 41931311 41935300 PCT