Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02944 ATGGGTATCGGCAAACTCCGGCAGATCACAGTTTGTTCTTCAAGATTAATGgtttctcactctATCTTCTACGAGTCGTTCGATGAGGATTTCGAAGGCCGTTGGACCGTTTCAAATAAGGACAGCTATAATGGTGTATGGAAGCATGCTAAGAGCGAGGGGCATGATGATTATGGACTCCTTGTCAGTGAGAAAGCAAGGAAATATGCCATAGTTAAAGAACTTAAAGAACTTGTGACCCTGAAGGATGAAACAGTTGTTCTTCAATTTGAGACTCGGCATCAGAGTGGCCTTGAATGCGGTGGTGCATACCTGAAATATCTTCGACCACAGGAGGCTGGATGGACACCTAAGGAATTTGACAATGAATCTCCATATTCTATTATGTTTGGTCCTGACAGGTGTGGGGCCACAAACAAGGTACACTTTATTGTCAAGCATAAGAATCCCAAGAGTGAGAAATACGTTGAGCACCATCTCAAGAATCCCCCATCTGTTCCATCTGACAAACTCACTCACGTATACACTGCTATTTTGAAGCCTAAAAATGAGTTGCGTGTTTTGATTGATGGGGAAGTGAAGAAGAAGGCAAATTTCTTATCCGCTGATGATTTTGAACCCCCTTTCATTCCTCCCAAGACAATCCCAGATCCTGATGACAAGAAACCCGAGGATTGGGATGAGAGAGCAAAAATTCCTGACCCAGATGCAGTAAAGCCAGATGATTGGGATGAGGATGCACCCATGGAAATTCTTGATGAGGAAGCTGAGAAACCTAAAGGATGGTTAGATGATGAACCCGAAGAAATTGATGACCCTGAAGCCACAAAACCAGAAGATTGGGATGACGAGGAGGATGGGGAATGGGAAGCCCCAAAAATTGATAACCCCAGGTGTGACTCTGCTCCTGGTTGTGGTGAGTGGAAAAGGCCAATGAAGAAGAATCCAGCTTACAAGGGAAAATGGCATGCCCCTCTCATTGACAACCCAGCTTATAAGGGTATATGGAAGCCACGTGATATTCCAAACCCTGACTACTTTGAACTTGAAAAGCCTGATTTTGAGCCCATCGCAGCTATTGGTATTGAGATTTGGACAATGCAAGATGGCATACTGTTTGACAACATTTTGATAGCTAATGATGGAAACATTGCAGCCTCTTATAGAGAGACTACATGGAAGCCTAAGTTTAATATTGAAAAAAAGAATCAAAAGGAAGAAGATTCTGATGGTGGTTTAGGTTTTCTTACAGACTTGCAGATGAAAGTATTTGAACTTTTGTACAAGATCGAGGACATTCCCTTCCTTAGTGATTATAGGATCAAAATACATGATCTCATTCAAAGGGGTGAGAAGCAACCAAATCTTACTATTGGAGTTCTCGTGTCTGTTGTGGTTGTCTTCTTGACAATCTTTTTCAAGCTCATATTTGGGGGGAAAAAGAAGCCGGCAAGGGTTGAGAAGCCATACCCAACACCCAAAGAATCTAAGGCCGACCAAAGTGGCGAAGAGAATTATGAAAACAAAGAAAAGGAGGAAACATCTACTTCTGCACCACGTAGGAGGATAAGGCGAGATTGA 1581 0.4238 MGIGKLRQITVCSSRLMVSHSIFYESFDEDFEGRWTVSNKDSYNGVWKHAKSEGHDDYGLLVSEKARKYAIVKELKELVTLKDETVVLQFETRHQSGLECGGAYLKYLRPQEAGWTPKEFDNESPYSIMFGPDRCGATNKVHFIVKHKNPKSEKYVEHHLKNPPSVPSDKLTHVYTAILKPKNELRVLIDGEVKKKANFLSADDFEPPFIPPKTIPDPDDKKPEDWDERAKIPDPDAVKPDDWDEDAPMEILDEEAEKPKGWLDDEPEEIDDPEATKPEDWDDEEDGEWEAPKIDNPRCDSAPGCGEWKRPMKKNPAYKGKWHAPLIDNPAYKGIWKPRDIPNPDYFELEKPDFEPIAAIGIEIWTMQDGILFDNILIANDGNIAASYRETTWKPKFNIEKKNQKEEDSDGGLGFLTDLQMKVFELLYKIEDIPFLSDYRIKIHDLIQRGEKQPNLTIGVLVSVVVVFLTIFFKLIFGGKKKPARVEKPYPTPKESKADQSGEENYENKEKEETSTSAPRRRIRRD 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02944 526 MobiDBLite consensus disorder prediction 266 290 - -
Adu03g02944 526 Gene3D - 23 388 - -
Adu03g02944 526 Pfam Calreticulin family 23 378 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Adu03g02944 526 Gene3D Calreticulin/calnexin, P domain 208 352 IPR009033 GO:0005509|GO:0005515
Adu03g02944 526 PANTHER - 182 526 - -
Adu03g02944 526 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 232 IPR013320 -
Adu03g02944 526 MobiDBLite consensus disorder prediction 203 306 - -
Adu03g02944 526 ProSitePatterns Calreticulin family repeated motif signature. 270 282 IPR018124 GO:0005509
Adu03g02944 526 PRINTS Calreticulin signature 95 113 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Adu03g02944 526 PRINTS Calreticulin signature 222 235 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Adu03g02944 526 PRINTS Calreticulin signature 270 292 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Adu03g02944 526 PRINTS Calreticulin signature 359 379 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Adu03g02944 526 PRINTS Calreticulin signature 124 140 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Adu03g02944 526 PRINTS Calreticulin signature 327 346 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Adu03g02944 526 MobiDBLite consensus disorder prediction 483 520 - -
Adu03g02944 526 PANTHER - 20 182 - -
Adu03g02944 526 ProSitePatterns Calreticulin family signature 2. 128 136 IPR018124 GO:0005509
Adu03g02944 526 MobiDBLite consensus disorder prediction 483 526 - -
Adu03g02944 526 MobiDBLite consensus disorder prediction 215 245 - -
Adu03g02944 526 PANTHER CALRETICULIN AND CALNEXIN 182 526 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Adu03g02944 526 PANTHER CALRETICULIN AND CALNEXIN 20 182 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Adu03g02944 526 SUPERFAMILY P-domain of calnexin/calreticulin 208 348 IPR009033 GO:0005509|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02944 Adu-Chr3 111301301 111306290 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02944 1 526 Miscellaneous Gene Families AT5G61790 70.398 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02944 K08054 - gmx:100785901 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02944 03 111301301 111306290 Adu03g02944 03 111301301 111306290 ECH