Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02855 ATGTTGTCCGCAGTGGATTGTTTGGTGAATAATGCTGGAATCGGCAAGCCTTCGGGATTCAAAGATTGGAGTAATGCTTCTGAATTTACTTCAATTATGGACGTAAATTTCTGGGGATCAGTTTATGGCACTTTATGTGCAATCCCACATCTGAAAACAAGCAGAGGCAGGATCGTTGTGATTGCATCGGCTCTTGGATGGTTCCCTCTCCCAAGATTCAGTATCTATAGTGCAAGCAAGGCAGCGATTATAAACTACTTTGAGACTCTGAGGATGGAACTTGGTTGTGCTATTGGCATAACAATAGTCACACCAGGTGTGGTCAAAACGGATCTGGGAGTAACTCTAATAAAAGAGGAGCGTATAATGGACATAATTCCAATGTTATCAGCATCTGAATTAGCAGAAAGCATAGTGAAAAGCGCATGCAGGGGAGATATGTACTTGACAGAGCCATCTTGGGTCAAGGTTTTGTTTCCTTTCAAGCTGCTTTATCCTCCACTAGTAGACTGGGCCTCACGCCTCTTCTTTGCTCTTTCCCCAAAAATAAATAATTCTGCAACAGAGCTGAAACCAGAGTAA 582 0.4261 MLSAVDCLVNNAGIGKPSGFKDWSNASEFTSIMDVNFWGSVYGTLCAIPHLKTSRGRIVVIASALGWFPLPRFSIYSASKAAIINYFETLRMELGCAIGITIVTPGVVKTDLGVTLIKEERIMDIIPMLSASELAESIVKSACRGDMYLTEPSWVKVLFPFKLLYPPLVDWASRLFFALSPKINNSATELKPE 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02855 193 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 3 14 IPR002347 -
Adu03g02855 193 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 56 64 IPR002347 -
Adu03g02855 193 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 95 IPR002347 -
Adu03g02855 193 PRINTS Glucose/ribitol dehydrogenase family signature 3 14 IPR002347 -
Adu03g02855 193 PRINTS Glucose/ribitol dehydrogenase family signature 50 66 IPR002347 -
Adu03g02855 193 PRINTS Glucose/ribitol dehydrogenase family signature 76 95 IPR002347 -
Adu03g02855 193 PRINTS Glucose/ribitol dehydrogenase family signature 96 113 IPR002347 -
Adu03g02855 193 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 183 IPR036291 -
Adu03g02855 193 PANTHER 11-BETA-HYDROXYSTEROID DEHYDROGENASE-LIKE 6 5 179 - -
Adu03g02855 193 Pfam short chain dehydrogenase 3 116 IPR002347 -
Adu03g02855 193 PANTHER RETINOL DEHYDROGENASE-RELATED 5 179 - -
Adu03g02855 193 Gene3D - 2 184 - -
Adu03g02855 193 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 63 91 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02855 Adu-Chr3 107972826 107973694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02855 5 128 Acyl Lipid Metabolism Gene Families AT1G24360 28.125 4.55e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02855 K22418 - gmx:100808990 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02855 03 107972826 107973694 Adu03g02855 03 107972826 107973694 ECH