Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02835 ATGGCCGAACCTGATTCCGAAACGCCTGAACAAACAAATACCCAGATAAGCACTAACGCAGAATGCACACCTGAACAACAACTTCAGATTGTAGACAAAGCTATTGATCGCCCTGAGTGGTTACCTGATGGGTGGACTGTGGATATCAGAACTCGCAAAACTGGTTCGCTTACGGGATCTGGATATAAGTGTTACATTGAACCATTAAATGGATACACATTCTACTCCAAACCTGCGGTATTACGATATCTGGAACCTAAGGACAGTACATGCATTCCGAAGAAGAAGAAAGCGAAATCCCCTGCCACAGGGTCCCCAAGCATCGTTGCGATTGAGAAATCCATTGCAGAGGATCTACCACCTGGGTGGATAAAAGAAGTAACAATTAGAAAAAACCACAACGGCATCAGGAAAGATCCGGTATATAAAGATCCAGTAAGTGGCCATGCTTTCCGTTCCAAGAGGGATGTACAGCGTTATCTTGCATCTGGGTATATTAGGCCTTCTAGAAAAAGAATCCAGGATGGAGACAAGTTAACTCCATCACCTGCTGGTAAAAGACACAAACTGAATGAGTCTGCACCTGAACAACAGCTTTCTGCTGGTGGAGCAACATTTGATAAAAGCAGCTTAGAACTGATAGATGACAACAGCTCAAGAAAAGGACAAGATGTGAACATCCAATCTGGAATGATGATGGTTGCTCCTATTTCTGTTGTAAAGATGCATTCACTAGAGGATAGGGCTGAAGACCTTTCTGAAATTGAGAAAATATCTGATCCAGATGATATGCAAGAGGAGCATGTTGGGAATAGGATGGAGAATGGTAATAAAAAGAATCACAGTAACCCTAGCAGATCCAAAGAGGGGGAGTTCAATGTGCATCGCCAATCTTCACCACAACTCCATAATATGAGAGAGCTGCACAGTCCTTCCCAGGTTTTGAAGCAACTTGGTGGATTTGATGATGACATGAAGATGAATAATTCCATGTCCTGTGAAAAGACCCCCAAACATGGTCGCAAAAGGTCAAAAGTTGAGATCAGTGCAGACTTGCAACAAAGTGAGGGTGTGTCAGCTGCAGAGCTTGCAGATTCTGCACCGCTAAAAAGAGAGTCAGCAAATAAAAAACGGAAATCTTATAAAACCCCACCTATTACAGGTGATCAACTGGAGAAACCGAGAGGTAAAGAAATGTATGATGAGAAATCAGAACCCCAAGTGTCATCGGCATTCAACTACTCTTCGTCTGACCCAAGCTTAGGAAATGCAACTAATAATCTGCAGAGTATGTTACTAGTTGAGAATGGACCTAATACTACTGGAATTGCTACAGTTCTTCAAACTGATATTCAAAAGAAATCGGTTGACAGTGTTACTGGAAGAAGCGAGGATGGATACCCACAGGTACGTTCAAATAAATCCAAAAAGAAGAAAGAGCTTAAAGTGCCTATGCGAGTATCAAAGCGACTTGCTGGCCTTGAACCTGAGGTACAGCCTTCCGGAAGAGCTCTTGAATATGCCACTAGAAAATTAAGAAAAGAACCACCACCTGCAACTGCTACTCAAATTTCAATTGATGGGGCATCTGACCATCTTAACCTTGAGGAAGAAACCAAGCTTACATGTCATGCATCTCATAGTTTGAAAACAGAAGTACTAAGAGAATCATCAAACCAAAGTGAGAAGTCATGCGATGCCCCAACTGTTCCCAAGGAACAATTGCAGAAAGTTATTGAAGCTGAAAATACCAGTGATGAGAGATCAGAGCCACAGCTTCCAGTGCCATTCGGGGGGGACTCTTGGTCAGATCCATGCCTAGAATTTGCATTCAAGACTCTTACTGATGATGTGCTATTTCATCCTGCAACTGACATTTTGCCTGTTATAACTCCCGATCTTAATTACCTACCAAATACGGAATTGCATGGAGTGATGATAACCAGTGAAGAAGCTCATGATAACTCGAACCAACCCCAGAGCAAGAAAGAGCTTAATATGGTTAACCCCTCAGAACCATTCCCAAGGCAACTAGAGATTGCTCCTAAATTTACAACTAGTGAACATTATGGTGATGAAGGCTACACAAGGAATTTAGCTGGAGAATCTTTACATAGTCAAGTTGGAAACGTAATGCCACTCATGCATCATACAGTGATACACCAAGATCCATTGAAGGAAGGTGTACAGGTTCATAAGGGTGAATCCATTATAATGGGGCCACCTCTGGTTGAAACTGGAACTGTAAACCATGATAACTCTAAGTCACAGTTCTGTGCCTCCTTTGCAAATTCTTGGTCTGATCCATGCCTTGAATTTGCATTTAAGACTCTTACAGGTGCGACATCAGCGGACAATAATTTACAGCAACCTCCAAATTTCCATAACCAGATCGATGGTGGCTCATTGTTTCCTGACTTTGGATCTTCCAGCTTTTCTCAGAGCAATTTCTCATTTTACCATGACATAGGAGTGAATTCCATGCCGGGGCAACAATCATCACGTAGCAATCCAATTCCACCCTTAGACAAGGCGAGCCAGCGAGGTTATCCTGAAGTTGATCCGCAAAATCAATATTCTCAGTTCCACAATCATTTTCCAAGGTAA 2607 0.4239 MAEPDSETPEQTNTQISTNAECTPEQQLQIVDKAIDRPEWLPDGWTVDIRTRKTGSLTGSGYKCYIEPLNGYTFYSKPAVLRYLEPKDSTCIPKKKKAKSPATGSPSIVAIEKSIAEDLPPGWIKEVTIRKNHNGIRKDPVYKDPVSGHAFRSKRDVQRYLASGYIRPSRKRIQDGDKLTPSPAGKRHKLNESAPEQQLSAGGATFDKSSLELIDDNSSRKGQDVNIQSGMMMVAPISVVKMHSLEDRAEDLSEIEKISDPDDMQEEHVGNRMENGNKKNHSNPSRSKEGEFNVHRQSSPQLHNMRELHSPSQVLKQLGGFDDDMKMNNSMSCEKTPKHGRKRSKVEISADLQQSEGVSAAELADSAPLKRESANKKRKSYKTPPITGDQLEKPRGKEMYDEKSEPQVSSAFNYSSSDPSLGNATNNLQSMLLVENGPNTTGIATVLQTDIQKKSVDSVTGRSEDGYPQVRSNKSKKKKELKVPMRVSKRLAGLEPEVQPSGRALEYATRKLRKEPPPATATQISIDGASDHLNLEEETKLTCHASHSLKTEVLRESSNQSEKSCDAPTVPKEQLQKVIEAENTSDERSEPQLPVPFGGDSWSDPCLEFAFKTLTDDVLFHPATDILPVITPDLNYLPNTELHGVMITSEEAHDNSNQPQSKKELNMVNPSEPFPRQLEIAPKFTTSEHYGDEGYTRNLAGESLHSQVGNVMPLMHHTVIHQDPLKEGVQVHKGESIIMGPPLVETGTVNHDNSKSQFCASFANSWSDPCLEFAFKTLTGATSADNNLQQPPNFHNQIDGGSLFPDFGSSSFSQSNFSFYHDIGVNSMPGQQSSRSNPIPPLDKASQRGYPEVDPQNQYSQFHNHFPR 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02835 868 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 31 106 IPR001739 GO:0003677
Adu03g02835 868 MobiDBLite consensus disorder prediction 254 293 - -
Adu03g02835 868 MobiDBLite consensus disorder prediction 1 25 - -
Adu03g02835 868 MobiDBLite consensus disorder prediction 580 599 - -
Adu03g02835 868 CDD MBD 119 161 - -
Adu03g02835 868 PANTHER OS04G0193200 PROTEIN 3 435 IPR038945 -
Adu03g02835 868 PANTHER OS04G0193200 PROTEIN 453 861 IPR038945 -
Adu03g02835 868 Gene3D - 117 170 - -
Adu03g02835 868 MobiDBLite consensus disorder prediction 171 204 - -
Adu03g02835 868 MobiDBLite consensus disorder prediction 335 349 - -
Adu03g02835 868 SUPERFAMILY DNA-binding domain 117 164 IPR016177 GO:0003677
Adu03g02835 868 MobiDBLite consensus disorder prediction 406 420 - -
Adu03g02835 868 MobiDBLite consensus disorder prediction 254 420 - -
Adu03g02835 868 Gene3D - 7 116 - -
Adu03g02835 868 PANTHER OS04G0193200 PROTEIN 453 861 - -
Adu03g02835 868 PANTHER OS04G0193200 PROTEIN 3 435 - -
Adu03g02835 868 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 109 183 IPR001739 GO:0003677
Adu03g02835 868 MobiDBLite consensus disorder prediction 369 383 - -
Adu03g02835 868 MobiDBLite consensus disorder prediction 454 481 - -
Adu03g02835 868 Pfam Methyl-CpG binding domain 117 164 IPR001739 GO:0003677
Adu03g02835 868 Pfam Methyl-CpG binding domain 39 88 IPR001739 GO:0003677
Adu03g02835 868 MobiDBLite consensus disorder prediction 171 193 - -
Adu03g02835 868 MobiDBLite consensus disorder prediction 294 311 - -
Adu03g02835 868 SUPERFAMILY DNA-binding domain 34 90 IPR016177 GO:0003677
Adu03g02835 868 MobiDBLite consensus disorder prediction 851 868 - -
Adu03g02835 868 MobiDBLite consensus disorder prediction 828 868 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02835 Adu-Chr3 107014947 107020957 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02835 - - adu:107479990 1741.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02835 03 107014947 107020957 Adu03g02835 03 107014947 107020957 ECH
Adu05g01044 05 14068678 14074144 Adu03g02835 03 107014947 107020957 PCT