Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02746 ATGTTAACATACCAACATCTAAAGTCTAAACTCGGCATCTGTTCTCCGAGAAAACCTCAGGTCATGGATACATTGTTATTGTTACTACTAGTTCTTATGTTTGTTCCACCAAGTCTAAACATGGTAGAGAGTCGCAAGGCTCCAATTTCGGACTACTTTGAGTACAGTGCTGTTAACTGCAGAGCTTACAGTGCATCGCTCACAGATTTTGGTGGTGTTGGGGATGGAACAACTTTGAACACAAAGGCTTTTCAATCAGCCATAGATCATATGAGCCAGTTCTCATCAACTGGAGGCTCTCAACTCTTTGTTCCTCCCGGAAGATGGTTAACCGGTAGCTTCAATCTCACTAGCCACTTCACTCTATTCCTACACCAAGATGCTGTCATCCTTGCCTCTCAGGATGAGAGTGACTGGCCACTCATTGATCCCTTGCCGTCGTACGGCCGAGGGAGGGATGCGCAAGGTGGAAGGTATAGCAGTCTAATTTTTGGAACCAACCTTACAGATGTGATCATCACTGGGGACAATGGTACAATAGATGGACAAGGCGATGTTTGGTGGAAAAAATTCCACAAGGGTGATCTCAGTTATACTAGGCCTTACCTTATTGAAATAATGTATTCAGAGAATGTTCAGATATCTCATCTAACTTTGGTCAATTCTCCTTCCTGGAATGTTCATCCTGTATATAGCAGCAATATTGTTGTTCAAGGGATCACAATACTTGCTCCAGTTAATTCACCAAATACTGATGGAATCAACCCTGACTCATGCACAAACACAAGAATTGAGGACTGCTACATTGTTTCTGGGGATGATTGTGTGGCGGTTAAGAGTGGTTGGGATGAGTATGGTATAGCATATGGAATGCCAACGAAACAACTAGCAATCCGGCGCCTGACGTGCATTTCACCAACCAGCGCTGTGATAGCGTTGGGGAGTGAAATGTCCGGTGGGATTGAGGATGTGAGGGCTGAGGACATTGTAGCCATCAACTCAGAATCAGGTGTTAGGATCAAAACTGCTGTAGGAAGAGGAGGCTATGTTAAGGACATATATGTGAGAAGGATGACTATGAGTACCATGAGATGGGCATTTTGGATGACAGGAAATTATGGTTCTCATGCTGACAACAACTATGATCCCAATGCACTTCCTCTCATTCAGAACATCAATTACCGGGACATGGTTGCTCAGAATGTGACTATGGCAGCAAGATTGGAGGGTATATCCAATGCTCCATTCACTGGCATATGTATATCCAATGTGACTATTCAACTATCAAAGAAACCTTACAAAGTTCAATGGAATTGCACCAATGTGGCTGGGATTTCTAGTGGTGTGACTCCAGAGCCATGTATGCTGTTGCCAGATCAGGGACCGGAGAAGATTGGGGTATGTACCTTCCCAGAAGATGGTTTGCCCATCGATGATGTCAAGTTCCAAACTTGCACTTATGCAAGGCATTTATGA 1476 0.4397 MLTYQHLKSKLGICSPRKPQVMDTLLLLLLVLMFVPPSLNMVESRKAPISDYFEYSAVNCRAYSASLTDFGGVGDGTTLNTKAFQSAIDHMSQFSSTGGSQLFVPPGRWLTGSFNLTSHFTLFLHQDAVILASQDESDWPLIDPLPSYGRGRDAQGGRYSSLIFGTNLTDVIITGDNGTIDGQGDVWWKKFHKGDLSYTRPYLIEIMYSENVQISHLTLVNSPSWNVHPVYSSNIVVQGITILAPVNSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLAIRRLTCISPTSAVIALGSEMSGGIEDVRAEDIVAINSESGVRIKTAVGRGGYVKDIYVRRMTMSTMRWAFWMTGNYGSHADNNYDPNALPLIQNINYRDMVAQNVTMAARLEGISNAPFTGICISNVTIQLSKKPYKVQWNCTNVAGISSGVTPEPCMLLPDQGPEKIGVCTFPEDGLPIDDVKFQTCTYARHL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02746 491 Gene3D - 49 448 IPR012334 -
Adu03g02746 491 SUPERFAMILY Pectin lyase-like 59 484 IPR011050 -
Adu03g02746 491 PANTHER PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 26 488 - -
Adu03g02746 491 Pfam Glycosyl hydrolases family 28 160 443 IPR000743 GO:0004650|GO:0005975
Adu03g02746 491 SMART pbh1 232 258 IPR006626 -
Adu03g02746 491 SMART pbh1 321 342 IPR006626 -
Adu03g02746 491 SMART pbh1 259 280 IPR006626 -
Adu03g02746 491 SMART pbh1 350 371 IPR006626 -
Adu03g02746 491 PANTHER PECTIN LYASE-RELATED 26 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02746 Adu-Chr3 101723706 101726222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02746 53 490 Glycoside Hydrolase AT4G23500 75.114 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02746 - - gmx:100785841 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02746 03 101723706 101726222 Adu03g02746 03 101723706 101726222 ECH