Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02624 ATGAATACTGAAGTCACCTTAGACGGCACCATAGATATAAATATATTAAGGAGCATCTATCAAAGCCTAGTTTGGATGGGGTGTTCTTTCAGCAAACAACGGCAGAGGCTTATTGGGCATCATAAACAGGAAGAAGACCCAGCAGCAGTTCTTGCTGTCCAAACCTGCTTTGATATTTGTGATATTGAAGCACTGTATGAGCTGTTCAAGAAATTAAGTAGCTCCATAGTTGATGACGGCCTCATCAGCAAAGAGGAATTTCAACTTGGCTTATTTGGTAACAGCAAGAAACGAAACCTTTTTGCCGATAGGATATTTGATTTATTTGATTCGGGAAAGGATGGGGTGATAGAGTTTGGAGAGTTTGTTAGAGGACTCAGCGTGTTCCATCCTGCAGCGCCCCAACCACAAAAAGCAGCTTTTGCATTTCGGCTCCACGATATACGGCAAAGTGGCTTTATTGAACGCGACGAGGTAAGAGAGATGATTGTGGCACTACTAAGCGAGTCCCAATTGGTGTTTTCTGATGACATAATTCAGCTCATAATCGATAAGGCTTTTCAAGAAGCAGATCTCAAAGGAGATGGTAAAATTGATCCAGACGAGTGGCAACAATTTGTGGCTCGAAATCCATCTTTATTGAGGAATATGACAATTCCACATTTGAAGGACCTTAATAAGGAGTTTCGTAATTTTGAATTAAGTCCAGACTTTATTGAAGATGATATAAGAAACCTCTGA 741 0.4062 MNTEVTLDGTIDINILRSIYQSLVWMGCSFSKQRQRLIGHHKQEEDPAAVLAVQTCFDICDIEALYELFKKLSSSIVDDGLISKEEFQLGLFGNSKKRNLFADRIFDLFDSGKDGVIEFGEFVRGLSVFHPAAPQPQKAAFAFRLHDIRQSGFIERDEVREMIVALLSESQLVFSDDIIQLIIDKAFQEADLKGDGKIDPDEWQQFVARNPSLLRNMTIPHLKDLNKEFRNFELSPDFIEDDIRNL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02624 246 Gene3D - 48 241 - -
Adu03g02624 246 PANTHER CALCINEURIN B-LIKE PROTEIN 5 26 237 - -
Adu03g02624 246 SUPERFAMILY EF-hand 51 223 IPR011992 -
Adu03g02624 246 ProSiteProfiles EF-hand calcium-binding domain profile. 97 132 IPR002048 GO:0005509
Adu03g02624 246 CDD EFh 138 208 IPR002048 GO:0005509
Adu03g02624 246 PRINTS Recoverin family signature 105 126 - -
Adu03g02624 246 PRINTS Recoverin family signature 152 170 - -
Adu03g02624 246 PRINTS Recoverin family signature 198 218 - -
Adu03g02624 246 Pfam EF hand 183 207 IPR002048 GO:0005509
Adu03g02624 246 PANTHER CALCINEURIN B 26 237 IPR045198 GO:0005509|GO:0019722|GO:0019900
Adu03g02624 246 SMART efh_1 101 129 IPR002048 GO:0005509
Adu03g02624 246 SMART efh_1 182 210 IPR002048 GO:0005509
Adu03g02624 246 SMART efh_1 138 166 IPR002048 GO:0005509
Adu03g02624 246 ProSiteProfiles EF-hand calcium-binding domain profile. 178 213 IPR002048 GO:0005509
Adu03g02624 246 ProSiteProfiles EF-hand calcium-binding domain profile. 134 169 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02624 Adu-Chr3 91110329 91112009 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02624 55 246 EF-hand Containing Proteins AT5G24270 61.979 6.71e-86 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02624 K06268 - vra:106766823 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02624 03 91110329 91112009 Adu03g02624 03 91110329 91112009 ECH