Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02452 ATGGAAGGAGGAGTGCCAGAAGCTGATGTCTCTGCTTTCAGAGAGTGTTTGGCACTTTCATGGAAGAATCCTTATGTTCTTCGTCTTGCTTTCTCTGCTGGAATTGGTGGCCTTCTCTTTGGCTACGACACAGGAGTAATATCCGGGGCTCTTTTATATATTAGAGATGATTTCAAAGCTGTGGATAGAGAGACATGGCTACAGgaagCCATAGTGAGCATGGCACTAGCCGGAGCAATAATAGGAGCCTCTGTCGGAGGATGGATCAACGATCGATTCGGAAGAAGAAAAGCAATAATTCTTGCCGATATACTCTTCTTCATTGGATCAGTTATCATGGCTGCTGCAACAAATCCTGCAATTCTCATCGTGGGTCGAGTTTTCGTTGGACTCGGCGTTGGAATGGCGTCGATGGCGTCCCCATTGTACATCTCGGAAGCTTCTCCGACCAGAGTTCGCGGTGCTCTGGTTAGTCTCAATGGATTCCTCATCACTGGTGGACAGTTTCTGTCCTACCTCATCAACTTGGCTTTCACAAATGCACCAGGAACATGGAGGTGGATGTTAGGAGTGGCTGCACTGCCGGCATTAATACAAATAGTTTTGATGACTATGCTCCCAGAATCACCTCGTTGGTTATTCAGAAAGGAAAGAGAAGAAGAAGCGAAAACAATTTTAAGAAGAATTTACCCTCCGGAGGATGTTGAAGATGAAATCAACACACTTAAGGAGTCAGTGGAGATGGAAATCAAGGAAGCCTCAAACTCAGACAAGGTGAGCATAACAAAAATGCTGAAAACAAAAACAGTTAGAAGAGGCTTATATGCAGGAATGGGCCTCCAAATCTTCCAACAATTCGTTGGCATCAACACAGTTATGTACTACAGCCCCACAATCGTGCAACTAGCTGGATTTGCATCAAACAGAGTAGCACTCCTTCTTTCTCTTGTAACTGCTGGTCTCAATGCAATTGGTTCAATTATGAGCATTTACTTCATTGACAAGACTGGTAGGAGGAAGCTTCTTTTGTTCAGCTTGTCCGGCGTTGTGGTGTCCCTTGTTGTCTTAACTGTTGTGTTCCATGAGACCACCACTCACTCTCCGATTGTTAGCCCCGCCGACACGGCGCTATTTAACAATGCTACTTGCCCTGCTTTTAACGGTACTTTGGATTCTGTCGGATCTGCTGGTGGATGGGATTGTATGAAGTGCCTTAAGGCTTCTCCAAGTTGCGGATTCTGCGCTTCTGGATCTAATAAGCTCTTACCTGGAGCATGTTTGATCTCAGGCGACACAACAGAAAAACAATGTGAAAATAATGAGAGATTATGGTACACAAGGGGGTGCCCAAGCAAATACGGTTTTCTTGCACTAATAGGCCTTGCACTTTACATAATTTTCTTCTCACCAGGAATGGGAACTGTTCCATGGGTTGTGAACTCTGAGATCTACCCTTTGAGGTACAGAGGGATATGTGGTGGAATGGCATCAACTTCAAATTGGGTTTCTAATCTAATTGTTGCTCAGTCCTTTCTGTCACTCACAGATGCTATTGGCACTTCTTACACTTTCATGATCTTTATATTTATCACCACTGCTGCCATTGTGTTTGTTTTGATCTTTGTTCCGGAAACTAAAGGGCTTCCCATTGAGGCTGTGGAAAAGATGCTTGACAGAAGGACTTTGAACTTCAAGTTTTGGCAGGGGAATCATGATGATGATGGTGATGATGAAGTAATGAAACAAAAGACTCAGTCAGTTTGA 1764 0.4399 MEGGVPEADVSAFRECLALSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKAVDRETWLQEAIVSMALAGAIIGASVGGWINDRFGRRKAIILADILFFIGSVIMAAATNPAILIVGRVFVGLGVGMASMASPLYISEASPTRVRGALVSLNGFLITGGQFLSYLINLAFTNAPGTWRWMLGVAALPALIQIVLMTMLPESPRWLFRKEREEEAKTILRRIYPPEDVEDEINTLKESVEMEIKEASNSDKVSITKMLKTKTVRRGLYAGMGLQIFQQFVGINTVMYYSPTIVQLAGFASNRVALLLSLVTAGLNAIGSIMSIYFIDKTGRRKLLLFSLSGVVVSLVVLTVVFHETTTHSPIVSPADTALFNNATCPAFNGTLDSVGSAGGWDCMKCLKASPSCGFCASGSNKLLPGACLISGDTTEKQCENNERLWYTRGCPSKYGFLALIGLALYIIFFSPGMGTVPWVVNSEIYPLRYRGICGGMASTSNWVSNLIVAQSFLSLTDAIGTSYTFMIFIFITTAAIVFVLIFVPETKGLPIEAVEKMLDRRTLNFKFWQGNHDDDGDDEVMKQKTQSV 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02452 587 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g02452 587 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g02452 587 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g02452 587 PRINTS Sugar transporter signature 458 479 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g02452 587 PRINTS Sugar transporter signature 481 493 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g02452 587 CDD MFS_HMIT_like 32 544 - -
Adu03g02452 587 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 1 570 - -
Adu03g02452 587 Gene3D MFS general substrate transporter like domains 21 386 IPR036259 -
Adu03g02452 587 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016021|GO:0022857|GO:0055085
Adu03g02452 587 Gene3D MFS general substrate transporter like domains 440 564 IPR036259 -
Adu03g02452 587 SUPERFAMILY MFS general substrate transporter 19 555 IPR036259 -
Adu03g02452 587 Pfam Sugar (and other) transporter 30 365 IPR005828 GO:0016021|GO:0022857|GO:0055085
Adu03g02452 587 Pfam Sugar (and other) transporter 451 556 IPR005828 GO:0016021|GO:0022857|GO:0055085
Adu03g02452 587 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 546 IPR020846 GO:0022857
Adu03g02452 587 TIGRFAM SP: MFS transporter, sugar porter (SP) family 21 366 IPR003663 GO:0016020|GO:0022857|GO:0055085
Adu03g02452 587 PANTHER GENERAL SUBSTRATE TRANSPORTER 1 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02452 Adu-Chr3 70814124 70823369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02452 1 568 Organic Solute Cotransporters AT1G30220 70.753 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02452 K08150 - gmx:100783605 956.051