Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02409 ATGGCAAAACTGAAGATCGGAGGGACGTGGGCGGGGGTTCTGGAAGACGTGGACTTGGACAGTTGGACCGTACCAAAGCTGCGGGAAGAGGTGGCCAGGCGCTCCAACTGCTCCCCTGACTCCATCAGTCTCATATGCGCCGGCAAAATCCTAAAGGACGATGACGCCACCGGCGGACACGGAGGAAATGGAAACTTGGCTCAGGTGGGCGTTAAGAACAATTCCAAGATCCTCGCCTCTCGTGTCTCACCTCAGGAAGGCAATTTGCTCAGGCAGGAGATCATGGCCGAAGAAGAACGCTCTCGCAGGCTTTCCCGGCTCAGGGCAGCTGCAACTGCATTAGCGGAAAGACATGCAGATGGTTCACTACCTGTTGAAGATTTCAACATAGAAGTTGAGGATCAAAGTGGCAAGAAAGTACGTCTAGGTTCTGAGACTGATCAAAGGGCAGTAATGATGGGATTGATGCTTCATGCAAAGGGAAAACGTCTTATTAAACAGGGAAATTACAAAGATGCACTAAAAGTGCTTAGCATGGGAGAGCTTATTGACAATGTTCCAATTCTGCAAATAGACATGGTGTGGTGCTACTTTATGATACGAGACATCAGATGGCTCTCAGATGCAGGAAAGCGTCTTGAAATGGCTAGGGTGGGAATTGAACGTGCTCATGGGAAGGATTCTTTCCGCCTCAGACTATTACAAGGAGGGCGCTATCCAGAATTAGCATTACATTTGAGACTGGACCTGCTTGAAGGGGTGGTCACATATCATAGTGGCCAGTTGGACAAATCAAGAAAAGCATTAGATTCTGCAAAAGCAAAATTTAACCAGCTGCAAGTCCCAGATGAAGCCTTATCATTTCTTATGAGCATGGGCTATAAAGAACGTGATGCAAAGAGAGCATTGCGAATGAACAATCAAGATGTGGGAAGTGCCATTGATTTCCTTGCTGAGGAGACAACGAAGAAATTGCAGAAACAGGAGGAAGATATCCGGAGAAGAACTGAAATTAGGGAGCAAAAGCGGTATGGGATGACACCGTTGAAGAAAGCTGTTGATCTAGAGAGATTGAAGGAATTGGCCTCTATTGGGTTTGACAAGGAGCTCGCTGCTGAAGCCCTTCGAAGAAATGAAAATGACACTCAGAAGGCATTGGATGATTTGACAAATCCAGAAACTAATTCCGCTTTGCAGGTTCATATTGAGTCGAGGAAAAGGAAGAGACAGAAACAAGCAACGGAAACTCAAATTGAAAAAGTTGTACACATGGGTTTTGAAAGATCAAGAGTGGTTGCTGCCTTCGAGGTCGGTGGCACTTTAGAAGAAGTAATCCAAAGACTGACGGCACTGCCTGAGGCTGACCATACGGCTGAAGCAATTCAAACTGCTGCTCCTGATGGCAGTGCAAGTTCATCTGCGCCTTTACCACATAACGTTTCTGAAATGCTAGAGCAAATTAATGATGTGGAAGATCCGTCGGATCTCAGCAAAGCAGAAGAGCGAGATGTGGAGATGGAAGACGAGCTATCTGAAGTTATAGTGAAGACTGATGCACTGGCTGACTATGACATTGAAGTGAACATAGAAGGGGAAGCCATAACCGAGTACTTGGCTCTGATAGAGGCTGCAGGCAGCTCTGGAAAAATGGCTCTTTCCCGGTAA 1665 0.4667 MAKLKIGGTWAGVLEDVDLDSWTVPKLREEVARRSNCSPDSISLICAGKILKDDDATGGHGGNGNLAQVGVKNNSKILASRVSPQEGNLLRQEIMAEEERSRRLSRLRAAATALAERHADGSLPVEDFNIEVEDQSGKKVRLGSETDQRAVMMGLMLHAKGKRLIKQGNYKDALKVLSMGELIDNVPILQIDMVWCYFMIRDIRWLSDAGKRLEMARVGIERAHGKDSFRLRLLQGGRYPELALHLRLDLLEGVVTYHSGQLDKSRKALDSAKAKFNQLQVPDEALSFLMSMGYKERDAKRALRMNNQDVGSAIDFLAEETTKKLQKQEEDIRRRTEIREQKRYGMTPLKKAVDLERLKELASIGFDKELAAEALRRNENDTQKALDDLTNPETNSALQVHIESRKRKRQKQATETQIEKVVHMGFERSRVVAAFEVGGTLEEVIQRLTALPEADHTAEAIQTAAPDGSASSSAPLPHNVSEMLEQINDVEDPSDLSKAEERDVEMEDELSEVIVKTDALADYDIEVNIEGEAITEYLALIEAAGSSGKMALSR 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02409 554 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 21 544 IPR039749 -
Adu03g02409 554 SUPERFAMILY UBA-like 275 320 IPR009060 GO:0005515
Adu03g02409 554 Gene3D - 15 86 - -
Adu03g02409 554 Gene3D - 355 392 - -
Adu03g02409 554 SUPERFAMILY Ubiquitin-like 21 78 IPR029071 -
Adu03g02409 554 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 280 320 IPR015940 -
Adu03g02409 554 ProSiteProfiles Ubiquitin domain profile. 23 77 IPR000626 GO:0005515
Adu03g02409 554 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 352 392 IPR015940 -
Adu03g02409 554 SUPERFAMILY UBA-like 350 392 IPR009060 GO:0005515
Adu03g02409 554 CDD UBA 358 387 - -
Adu03g02409 554 Gene3D - 258 333 - -
Adu03g02409 554 SMART uba_6 354 391 IPR015940 -
Adu03g02409 554 SMART uba_6 414 450 IPR015940 -
Adu03g02409 554 SMART uba_6 282 319 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02409 Adu-Chr3 62945131 62951536 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02409 - - aip:107630532 1001.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02409 03 62945131 62951536 Adu03g02409 03 62945131 62951536 ECH